Cpa|evm.model.tig00000640.22

Description : Exosome complex exonuclease RRP44 homolog A OS=Arabidopsis thaliana

Gene families : OG0001141 (Archaeplastida) Phylogenetic Tree(s): OG0001141_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00000640.22
Cluster	HCCA: Cluster_55

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00044p00129280	evm_27.TU.AmTr_v1...	RNA processing.RNA decay.exosome complex.associated...	0.02	Archaeplastida
AMTR_s00176p00064210	evm_27.TU.AmTr_v1...	DIS3-like exonuclease 2 OS=Arabidopsis thaliana	0.02	Archaeplastida
Cre14.g613850	No alias	Exosome complex exonuclease RRP44 homolog A...	0.05	Archaeplastida
GSVIVT01022300001	No alias	RNA processing.RNA decay.exosome complex.associated...	0.01	Archaeplastida
LOC_Os02g51780.1	No alias	DIS3-like exonuclease 2 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_10433522g0020	No alias	Exosome complex exonuclease RRP44 homolog A...	0.01	Archaeplastida
MA_15005g0010	No alias	Exosome complex exonuclease RRP44 homolog A...	0.01	Archaeplastida
MA_207701g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_40294g0010	No alias	DIS3-like exonuclease 2 OS=Arabidopsis thaliana...	0.01	Archaeplastida
Pp3c2_21290V3.1	No alias	Ribonuclease II/R family protein	0.01	Archaeplastida
Smo156135	No alias	RNA processing.RNA decay.exosome complex.associated...	0.02	Archaeplastida
Smo445437	No alias	DIS3-like exonuclease 2 OS=Arabidopsis thaliana	0.02	Archaeplastida
Zm00001e000231_P001	No alias	exoribonuclease (Dis3/RRP44)	0.01	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004540	ribonuclease activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002716	PIN_dom	37	153
IPR033770	RRP44_S1	915	1006
IPR033771	Rrp44_CSD1	212	287

External Links

No external refs found!