Cpa|evm.model.tig00000681.7

Description : ABC transporter C family member 1 OS=Arabidopsis thaliana

Gene families : OG0000058 (Archaeplastida) Phylogenetic Tree(s): OG0000058_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00000681.7
Cluster	HCCA: Cluster_219

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00053p00069740	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.01	Archaeplastida
AMTR_s00056p00223220	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.01	Archaeplastida
AMTR_s00065p00212850	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
AMTR_s00090p00174380	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.01	Archaeplastida
AMTR_s00092p00037330	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.01	Archaeplastida
AMTR_s00149p00037740	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.01	Archaeplastida
Cre02.g103250	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Cre04.g228650	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
GSVIVT01019467001	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
LOC_Os01g25386.1	No alias	subfamily ABCC transporter	0.01	Archaeplastida
LOC_Os06g08560.1	No alias	subfamily ABCC transporter	0.01	Archaeplastida
MA_10434414g0010	No alias	ABC transporter C family member 1 OS=Arabidopsis...	0.02	Archaeplastida
MA_10434717g0010	No alias	subfamily ABCC transporter	0.02	Archaeplastida
MA_837292g0010	No alias	ABC transporter C family member 5 OS=Arabidopsis...	0.02	Archaeplastida
Mp5g02230.1	No alias	subfamily ABCC transporter	0.01	Archaeplastida
Mp5g13190.1	No alias	subfamily ABCC transporter	0.01	Archaeplastida
Mp7g13860.1	No alias	subfamily ABCC transporter	0.01	Archaeplastida
Pp3c13_19960V3.1	No alias	multidrug resistance-associated protein 5	0.01	Archaeplastida
Pp3c17_10760V3.1	No alias	multidrug resistance-associated protein 10	0.03	Archaeplastida
Pp3c21_7530V3.1	No alias	multidrug resistance-associated protein 5	0.02	Archaeplastida
Zm00001e008672_P001	No alias	subfamily ABCC transporter	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042623	ATPase activity, coupled	None	Extended
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043492	ATPase activity, coupled to movement of substances	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	481	605
IPR011527	ABC1_TM_dom	829	981
IPR011527	ABC1_TM_dom	1257	1325
IPR011527	ABC1_TM_dom	124	260
IPR011527	ABC1_TM_dom	283	414

External Links

No external refs found!

Cpa|evm.model.tig00000681.7

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation