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  5. AT1G72350

AT1G72350


Description : MADS-box transcription factor family protein


Gene families : OG0000011 (Archaeplastida) Phylogenetic Tree(s): OG0000011_tree ,
OG_05_0000008 (LandPlants) Phylogenetic Tree(s): OG_05_0000008_tree ,
OG_06_0000013 (SeedPlants) Phylogenetic Tree(s): OG_06_0000013_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G72350
Cluster HCCA: Cluster_266

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00217560 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
AT4G36590 No alias MADS-box transcription factor family protein 0.02 Archaeplastida
AT4G37435 No alias No description available 0.02 Archaeplastida
AT5G60440 AGL62 AGAMOUS-like 62 0.03 Archaeplastida
GSVIVT01021534001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
LOC_Os02g07430.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
LOC_Os03g11614.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
LOC_Os04g52410.2 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
LOC_Os05g11380.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
LOC_Os12g10540.3 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Pp3c16_19170V3.1 No alias AGAMOUS-like 61 0.01 Archaeplastida
Pp3c17_13070V3.1 No alias AGAMOUS-like 66 0.02 Archaeplastida
Pp3c17_24040V3.1 No alias AGAMOUS-like 66 0.01 Archaeplastida
Pp3c25_6940V3.1 No alias AGAMOUS-like 62 0.01 Archaeplastida
Pp3c3_31770V3.1 No alias AGAMOUS-like 104 0.01 Archaeplastida
Pp3c4_3820V3.1 No alias AGAMOUS-like 66 0.01 Archaeplastida
Pp3c8_6890V3.1 No alias AGAMOUS-like 104 0.01 Archaeplastida
Pp3c8_6920V3.1 No alias AGAMOUS-like 66 0.01 Archaeplastida
Pp3c9_1370V3.1 No alias AGAMOUS-like 66 0.01 Archaeplastida
Solyc02g084630.3.1 No alias transcription factor (MADS/AGL) 0.01 Archaeplastida
Solyc02g091550.2.1 No alias transcription factor (MADS/AGL) 0.01 Archaeplastida
Zm00001e003667_P001 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Zm00001e026007_P004 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e030373_P001 No alias transcription factor (MADS/AGL) 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 55 98
No external refs found!