Cpa|evm.model.tig00000792.17

Description : RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).SPF45/RBM17 pre-mRNA splicing factor

Gene families : OG0007004 (Archaeplastida) Phylogenetic Tree(s): OG0007004_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00000792.17
Cluster	HCCA: Cluster_172

Target	Alias	Description	ECC score	Gene Family Method	Actions
Mp2g10810.1	No alias	pre-mRNA splicing factor (SPF45/RBM17)	0.01	Archaeplastida
Pp3c2_18610V3.1	No alias	D111/G-patch domain-containing protein	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000467	G_patch_dom	216	246
IPR000504	RRM_dom	304	357

External Links

No external refs found!

Cpa|evm.model.tig00000792.17

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation