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  5. Cpa|evm.model.tig00000829.16

Cpa|evm.model.tig00000829.16


Description : Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qc-type SNARE components.SYP6 group protein


Gene families : OG0005043 (Archaeplastida) Phylogenetic Tree(s): OG0005043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000829.16
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00072p00173000 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 Archaeplastida
AT1G31660 No alias CONTAINS InterPro DOMAIN/s: Bystin (InterPro:IPR007955);... 0.03 Archaeplastida
Cre01.g063267 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 Archaeplastida
GSVIVT01038352001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 Archaeplastida
LOC_Os09g18320.1 No alias SSU processome assembly factor (ENP1) 0.02 Archaeplastida
Mp5g10140.1 No alias SSU processome assembly factor (ENP1) 0.06 Archaeplastida
Pp3c10_5710V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c14_4070V3.1 No alias No annotation 0.03 Archaeplastida
Solyc07g056550.3.1 No alias SSU processome assembly factor (ENP1) 0.02 Archaeplastida
Zm00001e006514_P004 No alias SSU processome assembly factor (ENP1) 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0048193 Golgi vesicle transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR015260 Syntaxin-6_N 8 101
IPR007955 Bystin 317 597
No external refs found!