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  5. AT1G73710

AT1G73710


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG0003733 (Archaeplastida) Phylogenetic Tree(s): OG0003733_tree ,
OG_05_0003722 (LandPlants) Phylogenetic Tree(s): OG_05_0003722_tree ,
OG_06_0003603 (SeedPlants) Phylogenetic Tree(s): OG_06_0003603_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G73710
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00261700 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g73710... 0.03 Archaeplastida
GSVIVT01018090001 No alias Pentatricopeptide repeat-containing protein At3g23020... 0.03 Archaeplastida
Gb_20571 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 Archaeplastida
MA_10426616g0010 No alias Pentatricopeptide repeat-containing protein At1g73710... 0.05 Archaeplastida
Solyc09g083110.3.1 No alias Pentatricopeptide repeat-containing protein At3g23020... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000304 response to singlet oxygen IEP Neighborhood
MF GO:0003729 mRNA binding IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004888 transmembrane signaling receptor activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005217 intracellular ligand-gated ion channel activity IEP Neighborhood
MF GO:0005244 voltage-gated ion channel activity IEP Neighborhood
MF GO:0005247 voltage-gated chloride channel activity IEP Neighborhood
MF GO:0005253 anion channel activity IEP Neighborhood
MF GO:0005254 chloride channel activity IEP Neighborhood
MF GO:0005261 cation channel activity IEP Neighborhood
MF GO:0005262 calcium channel activity IEP Neighborhood
BP GO:0006264 mitochondrial DNA replication IEP Neighborhood
BP GO:0006783 heme biosynthetic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006821 chloride transport IEP Neighborhood
BP GO:0006874 cellular calcium ion homeostasis IEP Neighborhood
BP GO:0006875 cellular metal ion homeostasis IEP Neighborhood
BP GO:0007584 response to nutrient IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0008066 glutamate receptor activity IEP Neighborhood
MF GO:0008308 voltage-gated anion channel activity IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
CC GO:0009526 plastid envelope IEP Neighborhood
CC GO:0009527 plastid outer membrane IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
CC GO:0009707 chloroplast outer membrane IEP Neighborhood
CC GO:0009941 chloroplast envelope IEP Neighborhood
BP GO:0010039 response to iron ion IEP Neighborhood
BP GO:0010343 singlet oxygen-mediated programmed cell death IEP Neighborhood
BP GO:0012501 programmed cell death IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015085 calcium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015108 chloride transmembrane transporter activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022832 voltage-gated channel activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
CC GO:0031967 organelle envelope IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
CC GO:0031969 chloroplast membrane IEP Neighborhood
CC GO:0031975 envelope IEP Neighborhood
BP GO:0032042 mitochondrial DNA metabolic process IEP Neighborhood
BP GO:0033258 plastid DNA metabolic process IEP Neighborhood
BP GO:0033259 plastid DNA replication IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
CC GO:0034357 photosynthetic membrane IEP Neighborhood
BP GO:0036473 cell death in response to oxidative stress IEP Neighborhood
MF GO:0038023 signaling receptor activity IEP Neighborhood
BP GO:0042168 heme metabolic process IEP Neighborhood
CC GO:0042170 plastid membrane IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
CC GO:0042651 thylakoid membrane IEP Neighborhood
BP GO:0043200 response to amino acid IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044434 chloroplast part IEP Neighborhood
CC GO:0044435 plastid part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
BP GO:0045036 protein targeting to chloroplast IEP Neighborhood
BP GO:0048878 chemical homeostasis IEP Neighborhood
BP GO:0050801 ion homeostasis IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055065 metal ion homeostasis IEP Neighborhood
BP GO:0055072 iron ion homeostasis IEP Neighborhood
BP GO:0055074 calcium ion homeostasis IEP Neighborhood
BP GO:0055076 transition metal ion homeostasis IEP Neighborhood
BP GO:0055080 cation homeostasis IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
BP GO:0071230 cellular response to amino acid stimulus IEP Neighborhood
BP GO:0071310 cellular response to organic substance IEP Neighborhood
BP GO:0071417 cellular response to organonitrogen compound IEP Neighborhood
BP GO:0071495 cellular response to endogenous stimulus IEP Neighborhood
BP GO:0072503 cellular divalent inorganic cation homeostasis IEP Neighborhood
BP GO:0072507 divalent inorganic cation homeostasis IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072596 establishment of protein localization to chloroplast IEP Neighborhood
BP GO:0072598 protein localization to chloroplast IEP Neighborhood
BP GO:0097468 programmed cell death in response to reactive oxygen species IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
BP GO:0098771 inorganic ion homeostasis IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
BP GO:1901699 cellular response to nitrogen compound IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 514 561
IPR002885 Pentatricopeptide_repeat 339 383
IPR002885 Pentatricopeptide_repeat 864 903
IPR002885 Pentatricopeptide_repeat 587 631
IPR002885 Pentatricopeptide_repeat 143 192
IPR002885 Pentatricopeptide_repeat 726 755
IPR002885 Pentatricopeptide_repeat 306 336
IPR002885 Pentatricopeptide_repeat 694 720
IPR002885 Pentatricopeptide_repeat 658 684
IPR002885 Pentatricopeptide_repeat 761 786
No external refs found!