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  5. Cpa|evm.model.tig00000851.24

Cpa|evm.model.tig00000851.24


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.CUL4-DDB1 ubiquitination complexes.COP10-DET1 (CDD) subcomplex.DDB1 core adaptor component


Gene families : OG0003490 (Archaeplastida) Phylogenetic Tree(s): OG0003490_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000851.24
Cluster HCCA: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
AT4G05420 DDB1A damaged DNA binding protein 1A 0.01 Archaeplastida
Cre10.g432000 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01021587001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Gb_36569 No alias component DDB1 of UV-damaged DNA-binding protein... 0.02 Archaeplastida
LOC_Os05g51480.1 No alias component DDB1 of UV-damaged DNA-binding protein... 0.01 Archaeplastida
MA_41156g0010 No alias component DDB1 of UV-damaged DNA-binding protein... 0.01 Archaeplastida
Mp4g15990.1 No alias component DDB1 of UV-damaged DNA-binding protein... 0.07 Archaeplastida
Pp3c9_22270V3.1 No alias damaged DNA binding protein 1A 0.04 Archaeplastida
Smo145521 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Solyc02g021650.3.1 No alias component DDB1 of UV-damaged DNA-binding protein... 0.01 Archaeplastida
Zm00001e026665_P002 No alias component DDB1 of UV-damaged DNA-binding protein... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004871 Cleavage/polyA-sp_fac_asu_C 654 936
No external refs found!