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  5. Cpa|evm.model.tig00000852.23

Cpa|evm.model.tig00000852.23


Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase guanyl-nucleotide exchange factor (ARF-GEF) activities.BIG-type ARF-GEF factor


Gene families : OG0001057 (Archaeplastida) Phylogenetic Tree(s): OG0001057_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000852.23
Cluster HCCA: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00031550 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 Archaeplastida
AT3G43300 ATMIN7, BEN1 HOPM interactor 7 0.01 Archaeplastida
AT3G60860 No alias SEC7-like guanine nucleotide exchange family protein 0.02 Archaeplastida
AT4G35380 No alias SEC7-like guanine nucleotide exchange family protein 0.02 Archaeplastida
AT4G38200 No alias SEC7-like guanine nucleotide exchange family protein 0.02 Archaeplastida
Cre09.g390319 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.01 Archaeplastida
GSVIVT01014993001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
GSVIVT01023854001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
GSVIVT01027623001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
Gb_04048 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.02 Archaeplastida
Gb_07642 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.03 Archaeplastida
LOC_Os03g14260.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.01 Archaeplastida
LOC_Os07g37750.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.01 Archaeplastida
MA_10429864g0010 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.03 Archaeplastida
MA_20138g0010 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.04 Archaeplastida
Mp7g11590.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.02 Archaeplastida
Mp8g18220.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.04 Archaeplastida
Pp3c11_12270V3.1 No alias SEC7-like guanine nucleotide exchange family protein 0.03 Archaeplastida
Pp3c18_8290V3.1 No alias HOPM interactor 7 0.02 Archaeplastida
Pp3c7_14180V3.1 No alias SEC7-like guanine nucleotide exchange family protein 0.02 Archaeplastida
Pp3c8_19790V3.1 No alias HOPM interactor 7 0.01 Archaeplastida
Smo173646 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
Smo85621 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 Archaeplastida
Solyc01g091460.3.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.01 Archaeplastida
Solyc01g112350.3.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.02 Archaeplastida
Solyc12g017830.3.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.02 Archaeplastida
Zm00001e010568_P001 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.02 Archaeplastida
Zm00001e025045_P001 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.01 Archaeplastida
Zm00001e035267_P004 No alias No annotation 0.01 Archaeplastida
Zm00001e037574_P001 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEA Interproscan
BP GO:0032012 regulation of ARF protein signal transduction IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032691 Sec7_N 315 470
IPR015403 Sec7_C 1045 1075
IPR000904 Sec7_dom 534 693
IPR032629 DCB_dom 15 187
No external refs found!