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  5. Cpa|evm.model.tig00000852.9

Cpa|evm.model.tig00000852.9


Description : RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.RS31/40/41 splicing factor


Gene families : OG0001617 (Archaeplastida) Phylogenetic Tree(s): OG0001617_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000852.9
Cluster HCCA: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
AT4G25500 ATRSP40,... arginine/serine-rich splicing factor 35 0.02 Archaeplastida
AT5G52040 At-RS41, RS41, ATRSP41 RNA-binding (RRM/RBD/RNP motifs) family protein 0.05 Archaeplastida
Cre16.g674250 No alias RNA processing.RNA splicing.spliceosome-associated... 0.05 Archaeplastida
GSVIVT01010623001 No alias RNA processing.RNA splicing.spliceosome-associated... 0.01 Archaeplastida
GSVIVT01010624001 No alias No description available 0.01 Archaeplastida
Gb_39834 No alias RS31/40/41 RNA splicing factor 0.01 Archaeplastida
LOC_Os04g02870.1 No alias RS31/40/41 RNA splicing factor 0.03 Archaeplastida
MA_10434350g0010 No alias RS31/40/41 RNA splicing factor 0.01 Archaeplastida
MA_10436130g0020 No alias RS31/40/41 RNA splicing factor 0.02 Archaeplastida
MA_465325g0010 No alias RS31/40/41 RNA splicing factor 0.01 Archaeplastida
Solyc03g026240.4.1 No alias RS31/40/41 RNA splicing factor 0.01 Archaeplastida
Zm00001e008772_P001 No alias RS31/40/41 RNA splicing factor 0.02 Archaeplastida
Zm00001e013507_P001 No alias RS31/40/41 RNA splicing factor 0.03 Archaeplastida
Zm00001e039070_P001 No alias RS31/40/41 RNA splicing factor 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 101 163
IPR000504 RRM_dom 8 65
No external refs found!