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  5. AT1G73960

AT1G73960 (TAF2)


Aliases : TAF2

Description : TBP-associated factor 2


Gene families : OG0003822 (Archaeplastida) Phylogenetic Tree(s): OG0003822_tree ,
OG_05_0006550 (LandPlants) Phylogenetic Tree(s): OG_05_0006550_tree ,
OG_06_0008516 (SeedPlants) Phylogenetic Tree(s): OG_06_0008516_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G73960
Cluster HCCA: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020554.29 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.01 Archaeplastida
Cre13.g583500 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.01 Archaeplastida
GSVIVT01008230001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.05 Archaeplastida
MA_20073g0010 No alias component TAF2 of TFIId basal transcription regulation complex 0.03 Archaeplastida
MA_27422g0020 No alias component TAF2 of TFIId basal transcription regulation complex 0.02 Archaeplastida
Mp1g11110.1 No alias component TAF2 of TFIId basal transcription regulation complex 0.03 Archaeplastida
Mp1g11120.1 No alias component TAF2 of TFIId basal transcription regulation complex 0.03 Archaeplastida
Pp3c18_6100V3.1 No alias TBP-associated factor 2 0.02 Archaeplastida
Smo402861 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
BP GO:0009630 gravitropism RCA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
BP GO:0000302 response to reactive oxygen species IEP Neighborhood
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
CC GO:0000775 chromosome, centromeric region IEP Neighborhood
CC GO:0000781 chromosome, telomeric region IEP Neighborhood
BP GO:0000911 cytokinesis by cell plate formation IEP Neighborhood
MF GO:0003713 transcription coactivator activity IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004176 ATP-dependent peptidase activity IEP Neighborhood
MF GO:0004430 1-phosphatidylinositol 4-kinase activity IEP Neighborhood
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Neighborhood
MF GO:0005457 GDP-fucose transmembrane transporter activity IEP Neighborhood
MF GO:0005459 UDP-galactose transmembrane transporter activity IEP Neighborhood
MF GO:0005460 UDP-glucose transmembrane transporter activity IEP Neighborhood
MF GO:0005496 steroid binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006491 N-glycan processing IEP Neighborhood
BP GO:0006493 protein O-linked glycosylation IEP Neighborhood
BP GO:0006517 protein deglycosylation IEP Neighborhood
BP GO:0006623 protein targeting to vacuole IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006955 immune response IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
BP GO:0007163 establishment or maintenance of cell polarity IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
MF GO:0008142 oxysterol binding IEP Neighborhood
MF GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity IEP Neighborhood
BP GO:0009100 glycoprotein metabolic process IEP Neighborhood
BP GO:0009266 response to temperature stimulus IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009409 response to cold IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
BP GO:0009636 response to toxic substance IEP Neighborhood
BP GO:0009642 response to light intensity IEP Neighborhood
BP GO:0009644 response to high light intensity IEP Neighborhood
BP GO:0009648 photoperiodism IEP Neighborhood
BP GO:0009756 carbohydrate mediated signaling IEP Neighborhood
BP GO:0009791 post-embryonic development IEP Neighborhood
BP GO:0009868 jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway IEP Neighborhood
BP GO:0009913 epidermal cell differentiation IEP Neighborhood
BP GO:0009933 meristem structural organization IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010048 vernalization response IEP Neighborhood
BP GO:0010182 sugar mediated signaling pathway IEP Neighborhood
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP Neighborhood
BP GO:0010374 stomatal complex development IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0010959 regulation of metal ion transport IEP Neighborhood
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Neighborhood
MF GO:0015215 nucleotide transmembrane transporter activity IEP Neighborhood
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Neighborhood
BP GO:0015783 GDP-fucose transmembrane transport IEP Neighborhood
BP GO:0015786 UDP-glucose transmembrane transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0016926 protein desumoylation IEP Neighborhood
BP GO:0016999 antibiotic metabolic process IEP Neighborhood
BP GO:0017000 antibiotic biosynthetic process IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0019915 lipid storage IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0030010 establishment of cell polarity IEP Neighborhood
BP GO:0030855 epithelial cell differentiation IEP Neighborhood
CC GO:0031306 intrinsic component of mitochondrial outer membrane IEP Neighborhood
CC GO:0031307 integral component of mitochondrial outer membrane IEP Neighborhood
BP GO:0032506 cytokinetic process IEP Neighborhood
CC GO:0032592 integral component of mitochondrial membrane IEP Neighborhood
BP GO:0032784 regulation of DNA-templated transcription, elongation IEP Neighborhood
MF GO:0032934 sterol binding IEP Neighborhood
MF GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity IEP Neighborhood
MF GO:0036080 purine nucleotide-sugar transmembrane transporter activity IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042493 response to drug IEP Neighborhood
BP GO:0042542 response to hydrogen peroxide IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
BP GO:0042743 hydrogen peroxide metabolic process IEP Neighborhood
BP GO:0042761 very long-chain fatty acid biosynthetic process IEP Neighborhood
BP GO:0043132 NAD transport IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043270 positive regulation of ion transport IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
BP GO:0045087 innate immune response IEP Neighborhood
BP GO:0045489 pectin biosynthetic process IEP Neighborhood
BP GO:0046677 response to antibiotic IEP Neighborhood
BP GO:0046834 lipid phosphorylation IEP Neighborhood
BP GO:0046854 phosphatidylinositol phosphorylation IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0048358 mucilage pectin biosynthetic process IEP Neighborhood
BP GO:0048363 mucilage pectin metabolic process IEP Neighborhood
BP GO:0048438 floral whorl development IEP Neighborhood
BP GO:0048467 gynoecium development IEP Neighborhood
BP GO:0048532 anatomical structure arrangement IEP Neighborhood
BP GO:0048573 photoperiodism, flowering IEP Neighborhood
BP GO:0050665 hydrogen peroxide biosynthetic process IEP Neighborhood
BP GO:0050826 response to freezing IEP Neighborhood
BP GO:0051050 positive regulation of transport IEP Neighborhood
BP GO:0051181 cofactor transport IEP Neighborhood
BP GO:0051182 coenzyme transport IEP Neighborhood
MF GO:0051184 cofactor transmembrane transporter activity IEP Neighborhood
MF GO:0051185 coenzyme transmembrane transporter activity IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
MF GO:0051724 NAD transmembrane transporter activity IEP Neighborhood
BP GO:0051924 regulation of calcium ion transport IEP Neighborhood
BP GO:0051928 positive regulation of calcium ion transport IEP Neighborhood
MF GO:0052742 phosphatidylinositol kinase activity IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0071216 cellular response to biotic stimulus IEP Neighborhood
BP GO:0071219 cellular response to molecule of bacterial origin IEP Neighborhood
BP GO:0071323 cellular response to chitin IEP Neighborhood
BP GO:0071417 cellular response to organonitrogen compound IEP Neighborhood
BP GO:0072334 UDP-galactose transmembrane transport IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
BP GO:0072665 protein localization to vacuole IEP Neighborhood
BP GO:0072666 establishment of protein localization to vacuole IEP Neighborhood
BP GO:0090480 purine nucleotide-sugar transmembrane transport IEP Neighborhood
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Neighborhood
BP GO:0090558 plant epidermis development IEP Neighborhood
CC GO:0098573 intrinsic component of mitochondrial membrane IEP Neighborhood
CC GO:0098687 chromosomal region IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1902410 mitotic cytokinetic process IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
BP GO:1903409 reactive oxygen species biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR014782 Peptidase_M1_N 284 481
No external refs found!