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  5. Cpa|evm.model.tig00001003.32

Cpa|evm.model.tig00001003.32


Description : Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1S small sigma subunit


Gene families : OG0000560 (Archaeplastida) Phylogenetic Tree(s): OG0000560_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001003.32
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Cre09.g394100 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 Archaeplastida
GSVIVT01015270001 No alias Vesicle trafficking.endomembrane trafficking.vacuolar... 0.01 Archaeplastida
LOC_Os12g10560.1 No alias small subunit sigma of AP-2 cargo adaptor complex 0.03 Archaeplastida
MA_130401g0010 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.01 Archaeplastida
Mp1g19570.1 No alias small subunit sigma of AP-2 cargo adaptor complex 0.01 Archaeplastida
Pp3c14_14670V3.1 No alias SNARE-like superfamily protein 0.02 Archaeplastida
Pp3c26_15020V3.1 No alias associated protein 19 0.03 Archaeplastida
Pp3c9_6760V3.1 No alias SNARE-like superfamily protein 0.03 Archaeplastida
Solyc01g109640.3.1 No alias small subunit sigma of AP-3 Golgi to vacuole cargo... 0.01 Archaeplastida
Solyc05g026130.3.1 No alias small subunit sigma of AP-4 vacuole cargo adaptor complex 0.02 Archaeplastida
Solyc11g005220.2.1 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.02 Archaeplastida
Zm00001e005895_P003 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.02 Archaeplastida
Zm00001e018362_P003 No alias small subunit sigma of AP-2 cargo adaptor complex 0.03 Archaeplastida
Zm00001e022339_P001 No alias small subunit sigma of AP-4 vacuole cargo adaptor complex 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 1 137
No external refs found!