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  5. Cpa|evm.model.tig00001024.6

Cpa|evm.model.tig00001024.6


Description : Spliceosome-associated protein 130 A OS=Arabidopsis thaliana


Gene families : OG0002788 (Archaeplastida) Phylogenetic Tree(s): OG0002788_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001024.6
Cluster HCCA: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
Cre08.g372800 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.06 Archaeplastida
GSVIVT01005970001 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.02 Archaeplastida
Gb_38044 No alias component SF3B3 of splicing factor 3B complex 0.01 Archaeplastida
LOC_Os02g04480.1 No alias component SF3B3 of splicing factor 3B complex 0.02 Archaeplastida
Mp7g13330.1 No alias component SF3B3 of splicing factor 3B complex 0.03 Archaeplastida
Pp3c12_11240V3.1 No alias Cleavage and polyadenylation specificity factor (CPSF) A... 0.03 Archaeplastida
Pp3c16_16800V3.1 No alias Cleavage and polyadenylation specificity factor (CPSF) A... 0.03 Archaeplastida
Pp3c4_5190V3.1 No alias Cleavage and polyadenylation specificity factor (CPSF) A... 0.03 Archaeplastida
Smo171237 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.02 Archaeplastida
Solyc04g010260.3.1 No alias component SF3B3 of splicing factor 3B complex 0.04 Archaeplastida
Zm00001e013611_P001 No alias component SF3B3 of splicing factor 3B complex 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004871 Cleavage/polyA-sp_fac_asu_C 14 109
No external refs found!