1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00001093.1

Cpa|evm.model.tig00001093.1


Description : Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana


Gene families : OG0005524 (Archaeplastida) Phylogenetic Tree(s): OG0005524_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001093.1
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00065250 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.01 Archaeplastida
AT1G55480 ZKT protein containing PDZ domain, a K-box domain, and a TPR region 0.01 Archaeplastida
GSVIVT01025488001 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 Archaeplastida
LOC_Os07g07540.1 No alias MET1 protein involved in PS-II assembly 0.03 Archaeplastida
Smo448423 No alias Photosynthesis.photophosphorylation.photosystem... 0.01 Archaeplastida
Solyc01g005520.4.1 No alias MET1 protein involved in PS-II assembly 0.02 Archaeplastida
Zm00001e032895_P001 No alias MET1 protein involved in PS-II assembly 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 635 695
IPR002885 Pentatricopeptide_repeat 496 556
IPR002885 Pentatricopeptide_repeat 356 414
IPR002885 Pentatricopeptide_repeat 577 624
IPR002885 Pentatricopeptide_repeat 437 484
No external refs found!