AT1G75960

Description : AMP-dependent synthetase and ligase family protein

Gene families : OG0000413 (Archaeplastida) Phylogenetic Tree(s): OG0000413_tree ,
OG_05_0000299 (LandPlants) Phylogenetic Tree(s): OG_05_0000299_tree ,
OG_06_0000164 (SeedPlants) Phylogenetic Tree(s): OG_06_0000164_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G75960
Cluster	HCCA: Cluster_1

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os03g04120.1	No alias	Probable acyl-activating enzyme 1, peroxisomal...	0.03	Archaeplastida
LOC_Os03g04130.1	No alias	Probable acyl-activating enzyme 1, peroxisomal...	0.02	Archaeplastida
Solyc12g099360.2.1	No alias	Acetate/butyrate--CoA ligase AAE7, peroxisomal...	0.03	Archaeplastida
Zm00001e030943_P001	No alias	Probable acyl-activating enzyme 5, peroxisomal...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	ISM	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IEP	Neighborhood
CC	GO:0000152	nuclear ubiquitin ligase complex	IEP	Neighborhood
BP	GO:0000280	nuclear division	IEP	Neighborhood
CC	GO:0000419	RNA polymerase V complex	IEP	Neighborhood
BP	GO:0000719	photoreactive repair	IEP	Neighborhood
BP	GO:0002097	tRNA wobble base modification	IEP	Neighborhood
BP	GO:0002098	tRNA wobble uridine modification	IEP	Neighborhood
MF	GO:0003864	3-methyl-2-oxobutanoate hydroxymethyltransferase activity	IEP	Neighborhood
MF	GO:0003872	6-phosphofructokinase activity	IEP	Neighborhood
MF	GO:0004022	alcohol dehydrogenase (NAD) activity	IEP	Neighborhood
MF	GO:0004045	aminoacyl-tRNA hydrolase activity	IEP	Neighborhood
MF	GO:0004360	glutamine-fructose-6-phosphate transaminase (isomerizing) activity	IEP	Neighborhood
MF	GO:0004402	histone acetyltransferase activity	IEP	Neighborhood
MF	GO:0004610	phosphoacetylglucosamine mutase activity	IEP	Neighborhood
MF	GO:0004614	phosphoglucomutase activity	IEP	Neighborhood
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Neighborhood
MF	GO:0005543	phospholipid binding	IEP	Neighborhood
MF	GO:0005544	calcium-dependent phospholipid binding	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
CC	GO:0005945	6-phosphofructokinase complex	IEP	Neighborhood
BP	GO:0006040	amino sugar metabolic process	IEP	Neighborhood
BP	GO:0006041	glucosamine metabolic process	IEP	Neighborhood
BP	GO:0006042	glucosamine biosynthetic process	IEP	Neighborhood
BP	GO:0006047	UDP-N-acetylglucosamine metabolic process	IEP	Neighborhood
BP	GO:0006048	UDP-N-acetylglucosamine biosynthetic process	IEP	Neighborhood
BP	GO:0006259	DNA metabolic process	IEP	Neighborhood
BP	GO:0006281	DNA repair	IEP	Neighborhood
BP	GO:0006290	pyrimidine dimer repair	IEP	Neighborhood
BP	GO:0006400	tRNA modification	IEP	Neighborhood
BP	GO:0006401	RNA catabolic process	IEP	Neighborhood
BP	GO:0006560	proline metabolic process	IEP	Neighborhood
BP	GO:0006561	proline biosynthetic process	IEP	Neighborhood
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Neighborhood
BP	GO:0006783	heme biosynthetic process	IEP	Neighborhood
BP	GO:0006807	nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0006813	potassium ion transport	IEP	Neighborhood
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	Neighborhood
BP	GO:0007135	meiosis II	IEP	Neighborhood
CC	GO:0008076	voltage-gated potassium channel complex	IEP	Neighborhood
MF	GO:0008080	N-acetyltransferase activity	IEP	Neighborhood
MF	GO:0008443	phosphofructokinase activity	IEP	Neighborhood
MF	GO:0008641	ubiquitin-like modifier activating enzyme activity	IEP	Neighborhood
BP	GO:0009057	macromolecule catabolic process	IEP	Neighborhood
BP	GO:0009408	response to heat	IEP	Neighborhood
BP	GO:0009647	skotomorphogenesis	IEP	Neighborhood
BP	GO:0009649	entrainment of circadian clock	IEP	Neighborhood
BP	GO:0009690	cytokinin metabolic process	IEP	Neighborhood
BP	GO:0009896	positive regulation of catabolic process	IEP	Neighborhood
BP	GO:0010098	suspensor development	IEP	Neighborhood
BP	GO:0010115	regulation of abscisic acid biosynthetic process	IEP	Neighborhood
BP	GO:0010286	heat acclimation	IEP	Neighborhood
MF	GO:0010301	xanthoxin dehydrogenase activity	IEP	Neighborhood
BP	GO:0010586	miRNA metabolic process	IEP	Neighborhood
BP	GO:0010587	miRNA catabolic process	IEP	Neighborhood
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015939	pantothenate metabolic process	IEP	Neighborhood
BP	GO:0015940	pantothenate biosynthetic process	IEP	Neighborhood
MF	GO:0016407	acetyltransferase activity	IEP	Neighborhood
MF	GO:0016410	N-acyltransferase activity	IEP	Neighborhood
CC	GO:0016602	CCAAT-binding factor complex	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	Neighborhood
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Neighborhood
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Neighborhood
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	Neighborhood
MF	GO:0016906	sterol 3-beta-glucosyltransferase activity	IEP	Neighborhood
BP	GO:0019255	glucose 1-phosphate metabolic process	IEP	Neighborhood
BP	GO:0019747	regulation of isoprenoid metabolic process	IEP	Neighborhood
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Neighborhood
CC	GO:0030118	clathrin coat	IEP	Neighborhood
CC	GO:0030125	clathrin vesicle coat	IEP	Neighborhood
CC	GO:0031461	cullin-RING ubiquitin ligase complex	IEP	Neighborhood
MF	GO:0034212	peptide N-acetyltransferase activity	IEP	Neighborhood
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	Neighborhood
BP	GO:0034661	ncRNA catabolic process	IEP	Neighborhood
CC	GO:0034702	ion channel complex	IEP	Neighborhood
CC	GO:0034703	cation channel complex	IEP	Neighborhood
CC	GO:0034705	potassium channel complex	IEP	Neighborhood
BP	GO:0034754	cellular hormone metabolic process	IEP	Neighborhood
BP	GO:0042168	heme metabolic process	IEP	Neighborhood
BP	GO:0042176	regulation of protein catabolic process	IEP	Neighborhood
BP	GO:0044265	cellular macromolecule catabolic process	IEP	Neighborhood
BP	GO:0045732	positive regulation of protein catabolic process	IEP	Neighborhood
BP	GO:0046349	amino sugar biosynthetic process	IEP	Neighborhood
BP	GO:0046483	heterocycle metabolic process	IEP	Neighborhood
BP	GO:0048285	organelle fission	IEP	Neighborhood
MF	GO:0048487	beta-tubulin binding	IEP	Neighborhood
BP	GO:0048581	negative regulation of post-embryonic development	IEP	Neighborhood
BP	GO:0048608	reproductive structure development	IEP	Neighborhood
BP	GO:0051211	anisotropic cell growth	IEP	Neighborhood
BP	GO:0051241	negative regulation of multicellular organismal process	IEP	Neighborhood
BP	GO:0051445	regulation of meiotic cell cycle	IEP	Neighborhood
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0061733	peptide-lysine-N-acetyltransferase activity	IEP	Neighborhood
BP	GO:0061983	meiosis II cell cycle process	IEP	Neighborhood
MF	GO:0070548	L-glutamine aminotransferase activity	IEP	Neighborhood
MF	GO:0070696	transmembrane receptor protein serine/threonine kinase binding	IEP	Neighborhood
CC	GO:0080008	Cul4-RING E3 ubiquitin ligase complex	IEP	Neighborhood
MF	GO:0080054	low-affinity nitrate transmembrane transporter activity	IEP	Neighborhood
BP	GO:0090304	nucleic acid metabolic process	IEP	Neighborhood
BP	GO:1901071	glucosamine-containing compound metabolic process	IEP	Neighborhood
BP	GO:1901073	glucosamine-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Neighborhood
CC	GO:1902494	catalytic complex	IEP	Neighborhood
CC	GO:1902495	transmembrane transporter complex	IEP	Neighborhood
BP	GO:1902930	regulation of alcohol biosynthetic process	IEP	Neighborhood
CC	GO:1990234	transferase complex	IEP	Neighborhood
CC	GO:1990351	transporter complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR025110	AMP-bd_C	454	531
IPR000873	AMP-dep_Synth/Lig	21	445

External Links

No external refs found!

AT1G75960

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation