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  5. Cpa|evm.model.tig00001339.6

Cpa|evm.model.tig00001339.6


No description available


Gene families : OG0000591 (Archaeplastida) Phylogenetic Tree(s): OG0000591_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001339.6
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AT1G20693 NFD2, HMG BETA... high mobility group B2 0.01 Archaeplastida
GSVIVT01026642001 No alias HMG1/2-like protein OS=Glycine max 0.03 Archaeplastida
GSVIVT01034361001 No alias High mobility group B protein 7 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_05796 No alias High mobility group B protein 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_22387 No alias High mobility group B protein 14 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Gb_34784 No alias High mobility group B protein 7 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os09g37910.1 No alias HMG1/2-like protein OS=Ipomoea nil (sp|p40619|hmgl_iponi : 99.4) 0.04 Archaeplastida
MA_72555g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_86565g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp8g07450.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc02g082700.3.1 No alias HMG1/2-like protein OS=Ipomoea nil (sp|p40619|hmgl_iponi : 82.0) 0.02 Archaeplastida
Solyc04g008820.3.1 No alias High mobility group B protein 7 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e010305_P004 No alias HMG1/2-like protein OS=Ipomoea nil (sp|p40619|hmgl_iponi : 113.0) 0.01 Archaeplastida
Zm00001e024274_P002 No alias High mobility group B protein 7 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e034918_P002 No alias HMG1/2-like protein OS=Ipomoea nil (sp|p40619|hmgl_iponi : 112.0) 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR009071 HMG_box_dom 194 241
IPR009071 HMG_box_dom 92 158
No external refs found!