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  5. Cpa|evm.model.tig00001501.3

Cpa|evm.model.tig00001501.3


Description : Pre-mRNA-processing factor 19 OS=Oryza sativa subsp. japonica


Gene families : OG0003024 (Archaeplastida) Phylogenetic Tree(s): OG0003024_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001501.3
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00212570 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.spliceosome-associated... 0.02 Archaeplastida
Cre02.g073650 No alias RNA processing.RNA splicing.spliceosome-associated... 0.05 Archaeplastida
LOC_Os10g32880.1 No alias component MAC3 of non-snRNP MOS4-associated complex 0.02 Archaeplastida
MA_20260g0010 No alias component MAC3 of non-snRNP MOS4-associated complex 0.01 Archaeplastida
Mp4g08560.1 No alias component MAC3 of non-snRNP MOS4-associated complex 0.02 Archaeplastida
Pp3c5_9900V3.1 No alias MOS4-associated complex 3A 0.01 Archaeplastida
Pp3c6_19920V3.1 No alias MOS4-associated complex 3A 0.02 Archaeplastida
Smo437541 No alias RNA processing.RNA splicing.spliceosome-associated... 0.01 Archaeplastida
Solyc09g090660.3.1 No alias component MAC3 of non-snRNP MOS4-associated complex 0.03 Archaeplastida
Zm00001e004625_P001 No alias component MAC3 of non-snRNP MOS4-associated complex 0.02 Archaeplastida
Zm00001e012723_P001 No alias component MAC3 of non-snRNP MOS4-associated complex 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 297 331
IPR001680 WD40_repeat 157 190
IPR001680 WD40_repeat 220 251
No external refs found!