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  5. AT1G77150

AT1G77150


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0001276 (LandPlants) Phylogenetic Tree(s): OG_05_0001276_tree ,
OG_06_0013912 (SeedPlants) Phylogenetic Tree(s): OG_06_0013912_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G77150

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00131520 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g13600... 0.01 Archaeplastida
AT1G08070 OTP82 Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 Archaeplastida
AT1G59720 CRR28 Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 Archaeplastida
AT2G39620 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.01 Archaeplastida
AT3G53360 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 Archaeplastida
AT5G39350 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 Archaeplastida
Smo447287 No alias No description available 0.01 Archaeplastida
Solyc02g072020.3.1 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003713 transcription coactivator activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0009404 toxin metabolic process IEP Neighborhood
BP GO:0009407 toxin catabolic process IEP Neighborhood
BP GO:0010583 response to cyclopentenone IEP Neighborhood
BP GO:0014070 response to organic cyclic compound IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0045036 protein targeting to chloroplast IEP Neighborhood
BP GO:0045037 protein import into chloroplast stroma IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0065002 intracellular protein transmembrane transport IEP Neighborhood
BP GO:0071806 protein transmembrane transport IEP Neighborhood
BP GO:0072596 establishment of protein localization to chloroplast IEP Neighborhood
BP GO:0072598 protein localization to chloroplast IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:0098754 detoxification IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 14 39
No external refs found!