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  5. Cpa|evm.model.tig00001542.23

Cpa|evm.model.tig00001542.23


Description : RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TATA box-binding protein (TBP) regulation.NC2 regulator complex.beta component


Gene families : OG0000142 (Archaeplastida) Phylogenetic Tree(s): OG0000142_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001542.23
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AT5G08190 NF-YB12 nuclear factor Y, subunit B12 0.03 Archaeplastida
Cre17.g739450 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.02 Archaeplastida
LOC_Os05g49780.1 No alias component NF-YB of NF-Y transcription factor complex 0.01 Archaeplastida
Smo227538 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.03 Archaeplastida
Solyc09g007290.4.1 No alias component NF-YB of NF-Y transcription factor complex 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 12 76
No external refs found!