Cpa|evm.model.tig00020516.11

Description : Chromatin organisation.histones.H3-type histone

Gene families : OG0000119 (Archaeplastida) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00020516.11
Cluster	HCCA: Cluster_94

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000262.5	No alias	Histone H3.3a OS=Lilium longiflorum	0.05	Archaeplastida
Cpa\|evm.model.tig00020693.4	No alias	Histone H3.3a OS=Lilium longiflorum	0.03	Archaeplastida
Cpa\|evm.model.tig00021038.65	No alias	Histone H3.3a OS=Lilium longiflorum	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0032993	protein-DNA complex	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044427	chromosomal part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
CC	GO:0044815	DNA packaging complex	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR007125	Histone_H2A/H2B/H3	10	136

External Links

No external refs found!