Cpa|evm.model.tig00020562.25

Description : RNA processing.RNA modification.rRNA/tRNA methylation.TRM4 tRNA cytidine-methyltransferase

Gene families : OG0002320 (Archaeplastida) Phylogenetic Tree(s): OG0002320_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00020562.25
Cluster	HCCA: Cluster_40

Target	Alias	Description	ECC score	Gene Family Method
AT2G22400	No alias	S-adenosyl-L-methionine-dependent methyltransferases...	0.02	Archaeplastida
Cre03.g179860	No alias	RNA processing.RNA modification.rRNA/tRNA...	0.09	Archaeplastida
GSVIVT01003416001	No alias	RNA processing.RNA modification.rRNA/tRNA...	0.02	Archaeplastida
LOC_Os09g29630.1	No alias	tRNA cytidine-methyltransferase (TRM4)	0.04	Archaeplastida
Mp3g05200.1	No alias	tRNA cytidine-methyltransferase (TRM4)	0.03	Archaeplastida
Pp3c15_5210V3.1	No alias	S-adenosyl-L-methionine-dependent methyltransferases...	0.03	Archaeplastida
Smo418525	No alias	RNA processing.RNA modification.rRNA/tRNA...	0.03	Archaeplastida
Solyc05g051520.3.1	No alias	tRNA cytidine-methyltransferase (TRM4)	0.06	Archaeplastida
Solyc11g010110.3.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e034437_P004	No alias	tRNA cytidine-methyltransferase (TRM4)	0.07	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0008168	methyltransferase activity	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001678	MeTrfase_RsmB/NOP2	158	408

External Links

No external refs found!