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  5. Cpa|evm.model.tig00020563.151

Cpa|evm.model.tig00020563.151


Description : RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.Sm-E component


Gene families : OG0003300 (Archaeplastida) Phylogenetic Tree(s): OG0003300_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020563.151
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00069690 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.02 Archaeplastida
AT2G18740 No alias Small nuclear ribonucleoprotein family protein 0.02 Archaeplastida
AT4G30330 No alias Small nuclear ribonucleoprotein family protein 0.02 Archaeplastida
Cre08.g385200 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.06 Archaeplastida
LOC_Os02g03440.1 No alias component Sm-E of U1/U2/U4/U5-associated Sm accessory... 0.05 Archaeplastida
LOC_Os08g05530.1 No alias component Sm-E of U1/U2/U4/U5-associated Sm accessory... 0.04 Archaeplastida
Mp5g07450.1 No alias component Sm-E of U1/U2/U4/U5-associated Sm accessory... 0.03 Archaeplastida
Pp3c14_15210V3.1 No alias Small nuclear ribonucleoprotein family protein 0.03 Archaeplastida
Pp3c2_10270V3.1 No alias Small nuclear ribonucleoprotein family protein 0.03 Archaeplastida
Solyc03g098470.3.1 No alias component Sm-E of U1/U2/U4/U5-associated Sm accessory... 0.01 Archaeplastida
Zm00001e016468_P001 No alias No annotation 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 18 82
No external refs found!