1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00020603.85

Cpa|evm.model.tig00020603.85


Description : RNA processing.organelle machineries.ribonuclease activities.PNP polynucleotide phosphorylase


Gene families : OG0001869 (Archaeplastida) Phylogenetic Tree(s): OG0001869_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020603.85
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00113p00140210 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.ribonuclease... 0.02 Archaeplastida
AT3G03710 RIF10, PNP polyribonucleotide nucleotidyltransferase, putative 0.02 Archaeplastida
AT5G14580 No alias polyribonucleotide nucleotidyltransferase, putative 0.05 Archaeplastida
Cre04.g214501 No alias RNA processing.organelle machineries.ribonuclease... 0.03 Archaeplastida
GSVIVT01029958001 No alias RNA processing.organelle machineries.ribonuclease... 0.02 Archaeplastida
GSVIVT01032436001 No alias RNA processing.organelle machineries.ribonuclease... 0.02 Archaeplastida
Gb_15670 No alias polynucleotide phosphorylase (PNP) 0.02 Archaeplastida
Gb_20425 No alias polynucleotide phosphorylase (PNP) 0.02 Archaeplastida
Mp7g12350.1 No alias polynucleotide phosphorylase (PNP) 0.03 Archaeplastida
Pp3c6_15550V3.1 No alias polyribonucleotide nucleotidyltransferase, putative 0.01 Archaeplastida
Smo77425 No alias RNA processing.organelle machineries.ribonuclease... 0.01 Archaeplastida
Smo84724 No alias RNA processing.organelle machineries.ribonuclease... 0.02 Archaeplastida
Solyc02g086600.3.1 No alias polynucleotide phosphorylase (PNP) 0.03 Archaeplastida
Solyc08g066120.4.1 No alias polynucleotide phosphorylase (PNP) 0.02 Archaeplastida
Zm00001e015113_P001 No alias polynucleotide phosphorylase (PNP) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001247 ExoRNase_PH_dom1 328 423
IPR001247 ExoRNase_PH_dom1 57 186
No external refs found!