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  5. Cpa|evm.model.tig00020614.25

Cpa|evm.model.tig00020614.25


Description : Probable methionine--tRNA ligase OS=Oryza sativa subsp. japonica


Gene families : OG0002980 (Archaeplastida) Phylogenetic Tree(s): OG0002980_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020614.25
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00209p00023450 evm_27.TU.AmTr_v1... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.01 Archaeplastida
AT4G13780 No alias methionine--tRNA ligase, putative / methionyl-tRNA... 0.05 Archaeplastida
Cre02.g087950 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.01 Archaeplastida
LOC_Os06g31210.1 No alias methionine-tRNA ligase 0.03 Archaeplastida
MA_10427001g0020 No alias Probable methionine--tRNA ligase OS=Oryza sativa subsp.... 0.03 Archaeplastida
MA_10436199g0010 No alias methionine-tRNA ligase 0.03 Archaeplastida
Mp6g20530.1 No alias methionine-tRNA ligase 0.04 Archaeplastida
Pp3c13_2300V3.1 No alias methionine--tRNA ligase, putative / methionyl-tRNA... 0.03 Archaeplastida
Zm00001e038714_P001 No alias methionine-tRNA ligase 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR015413 Methionyl/Leucyl_tRNA_Synth 191 260
IPR015413 Methionyl/Leucyl_tRNA_Synth 404 480
No external refs found!