Cpa|evm.model.tig00020614.39

Description : Chromatin organisation.chromatin remodeling complexes.ATPase core components.Rad54-like group.Rad54 chromatin remodeling factor

Gene families : OG0002451 (Archaeplastida) Phylogenetic Tree(s): OG0002451_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00020614.39
Cluster	HCCA: Cluster_46

Target	Alias	Description	ECC score	Gene Family Method
AT3G19210	ATRAD54, CHR25, RAD54	homolog of RAD54	0.02	Archaeplastida
Cre10.g430950	No alias	Chromatin organisation.chromatin remodeling...	0.02	Archaeplastida
GSVIVT01031756001	No alias	Protein CHROMATIN REMODELING 25 OS=Arabidopsis thaliana	0.01	Archaeplastida
Gb_13098	No alias	Protein CHROMATIN REMODELING 25 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Gb_13099	No alias	DNA repair and recombination protein RAD54 OS=Oryza...	0.02	Archaeplastida
Gb_22242	No alias	Protein CHROMATIN REMODELING 25 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Gb_22245	No alias	DNA repair and recombination protein RAD54 OS=Oryza...	0.03	Archaeplastida
LOC_Os02g52510.1	No alias	chromatin remodeling factor (Rad54)	0.06	Archaeplastida
MA_10427620g0010	No alias	DNA repair and recombination protein RAD54 OS=Oryza...	0.01	Archaeplastida
Mp6g06120.1	No alias	chromatin remodeling factor (Rad54)	0.08	Archaeplastida
Pp3c5_12730V3.1	No alias	homolog of RAD54	0.02	Archaeplastida
Smo412612	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.01	Archaeplastida
Smo421707	No alias	Protein CHROMATIN REMODELING 25 OS=Arabidopsis thaliana	0.01	Archaeplastida
Solyc04g056410.3.1	No alias	chromatin remodeling factor (Rad54)	0.07	Archaeplastida
Zm00001e015936_P001	No alias	chromatin remodeling factor (Rad54)	0.02	Archaeplastida
Zm00001e036943_P001	No alias	no hits & (original description: none)	0.01	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000330	SNF2_N	154	453
IPR001650	Helicase_C	506	619

External Links

No external refs found!