AT1G79840 (GL2)

Aliases : GL2

Description : HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START domain

Gene families : OG0000182 (Archaeplastida) Phylogenetic Tree(s): OG0000182_tree ,
OG_05_0000064 (LandPlants) Phylogenetic Tree(s): OG_05_0000064_tree ,
OG_06_0001940 (SeedPlants) Phylogenetic Tree(s): OG_06_0001940_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G79840
Cluster	HCCA: Cluster_23

Target	Alias	Description	ECC score	Gene Family Method
AT1G05230	HDG2	homeodomain GLABROUS 2	0.02	Archaeplastida
AT2G32370	HDG3	homeodomain GLABROUS 3	0.05	Archaeplastida
AT4G04890	PDF2	protodermal factor 2	0.05	Archaeplastida
AT4G21750	ATML1	Homeobox-leucine zipper family protein / lipid-binding...	0.05	Archaeplastida
AT4G26920	No alias	START (StAR-related lipid-transfer) lipid-binding domain	0.04	Archaeplastida
AT5G07260	No alias	START (StAR-related lipid-transfer) lipid-binding domain	0.04	Archaeplastida
AT5G52170	HDG7	homeodomain GLABROUS 7	0.03	Archaeplastida
GSVIVT01001986001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.04	Archaeplastida
GSVIVT01012643001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.01	Archaeplastida
LOC_Os01g57890.1	No alias	transcription factor (HD-ZIP IV)	0.03	Archaeplastida
LOC_Os06g10600.1	No alias	transcription factor (HD-ZIP IV)	0.02	Archaeplastida
LOC_Os08g08820.2	No alias	transcription factor (HD-ZIP IV)	0.02	Archaeplastida
LOC_Os09g35760.1	No alias	transcription factor (HD-ZIP IV)	0.03	Archaeplastida
MA_122121g0010	No alias	transcription factor (HD-ZIP IV)	0.05	Archaeplastida
MA_38472g0010	No alias	transcription factor (HD-ZIP IV)	0.05	Archaeplastida
Pp3c17_16910V3.1	No alias	protodermal factor 2	0.02	Archaeplastida
Solyc03g098200.4.1	No alias	transcription factor (HD-ZIP IV)	0.03	Archaeplastida
Solyc03g120620.3.1	No alias	transcription factor (HD-ZIP IV)	0.03	Archaeplastida
Solyc07g041850.3.1	No alias	transcription factor (HD-ZIP IV)	0.04	Archaeplastida
Solyc12g005830.3.1	No alias	transcription factor (HD-ZIP IV)	0.03	Archaeplastida
Zm00001e017088_P001	No alias	transcription factor (HD-ZIP IV)	0.03	Archaeplastida
Zm00001e033353_P003	No alias	no hits & (original description: none)	0.01	Archaeplastida
Zm00001e034755_P001	No alias	transcription factor (HD-ZIP IV)	0.03	Archaeplastida
Zm00001e041435_P003	No alias	transcription factor (HD-ZIP IV)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0001708	cell fate specification	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISS	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009888	tissue development	RCA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009957	epidermal cell fate specification	IMP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0009996	negative regulation of cell fate specification	None	Extended
BP	GO:0010061	regulation of trichoblast fate specification	None	Extended
BP	GO:0010062	negative regulation of trichoblast fate specification	IMP	Interproscan
BP	GO:0010453	regulation of cell fate commitment	None	Extended
BP	GO:0010454	negative regulation of cell fate commitment	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022603	regulation of anatomical structure morphogenesis	None	Extended
BP	GO:0030154	cell differentiation	RCA	Interproscan
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0042659	regulation of cell fate specification	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045595	regulation of cell differentiation	None	Extended
BP	GO:0045596	negative regulation of cell differentiation	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051093	negative regulation of developmental process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051241	negative regulation of multicellular organismal process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903888	regulation of plant epidermal cell differentiation	None	Extended
BP	GO:1903889	negative regulation of plant epidermal cell differentiation	None	Extended
BP	GO:1905421	regulation of plant organ morphogenesis	None	Extended
BP	GO:1905422	negative regulation of plant organ morphogenesis	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2000067	regulation of root morphogenesis	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2000280	regulation of root development	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003848	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity	IEP	Neighborhood
MF	GO:0004029	aldehyde dehydrogenase (NAD) activity	IEP	Neighborhood
MF	GO:0004031	aldehyde oxidase activity	IEP	Neighborhood
MF	GO:0004156	dihydropteroate synthase activity	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0004564	beta-fructofuranosidase activity	IEP	Neighborhood
MF	GO:0004650	polygalacturonase activity	IEP	Neighborhood
MF	GO:0004805	trehalose-phosphatase activity	IEP	Neighborhood
MF	GO:0005355	glucose transmembrane transporter activity	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
BP	GO:0006349	regulation of gene expression by genetic imprinting	IEP	Neighborhood
MF	GO:0008171	O-methyltransferase activity	IEP	Neighborhood
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	Neighborhood
BP	GO:0009396	folic acid-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0009812	flavonoid metabolic process	IEP	Neighborhood
BP	GO:0009813	flavonoid biosynthetic process	IEP	Neighborhood
BP	GO:0009960	endosperm development	IEP	Neighborhood
BP	GO:0010023	proanthocyanidin biosynthetic process	IEP	Neighborhood
BP	GO:0010026	trichome differentiation	IEP	Neighborhood
BP	GO:0010051	xylem and phloem pattern formation	IEP	Neighborhood
BP	GO:0010191	mucilage metabolic process	IEP	Neighborhood
BP	GO:0010192	mucilage biosynthetic process	IEP	Neighborhood
BP	GO:0010214	seed coat development	IEP	Neighborhood
MF	GO:0010279	indole-3-acetic acid amido synthetase activity	IEP	Neighborhood
MF	GO:0010340	carboxyl-O-methyltransferase activity	IEP	Neighborhood
MF	GO:0010341	gibberellin carboxyl-O-methyltransferase activity	IEP	Neighborhood
MF	GO:0015145	monosaccharide transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015149	hexose transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015152	glucose-6-phosphate transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015712	hexose phosphate transport	IEP	Neighborhood
MF	GO:0016623	oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor	IEP	Neighborhood
MF	GO:0016707	gibberellin 3-beta-dioxygenase activity	IEP	Neighborhood
MF	GO:0016778	diphosphotransferase activity	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
MF	GO:0018479	benzaldehyde dehydrogenase (NAD+) activity	IEP	Neighborhood
MF	GO:0018488	aryl-aldehyde oxidase activity	IEP	Neighborhood
MF	GO:0042409	caffeoyl-CoA O-methyltransferase activity	IEP	Neighborhood
BP	GO:0042559	pteridine-containing compound biosynthetic process	IEP	Neighborhood
CC	GO:0043076	megasporocyte nucleus	IEP	Neighborhood
CC	GO:0043078	polar nucleus	IEP	Neighborhood
BP	GO:0046653	tetrahydrofolate metabolic process	IEP	Neighborhood
BP	GO:0046654	tetrahydrofolate biosynthetic process	IEP	Neighborhood
BP	GO:0046688	response to copper ion	IEP	Neighborhood
BP	GO:0048317	seed morphogenesis	IEP	Neighborhood
BP	GO:0048354	mucilage biosynthetic process involved in seed coat development	IEP	Neighborhood
BP	GO:0048359	mucilage metabolic process involved in seed coat development	IEP	Neighborhood
MF	GO:0050362	L-tryptophan:2-oxoglutarate aminotransferase activity	IEP	Neighborhood
BP	GO:0051552	flavone metabolic process	IEP	Neighborhood
BP	GO:0051553	flavone biosynthetic process	IEP	Neighborhood
BP	GO:0051554	flavonol metabolic process	IEP	Neighborhood
BP	GO:0051555	flavonol biosynthetic process	IEP	Neighborhood
MF	GO:0070529	L-tryptophan aminotransferase activity	IEP	Neighborhood
BP	GO:0071514	genetic imprinting	IEP	Neighborhood
MF	GO:0080031	methyl salicylate esterase activity	IEP	Neighborhood
BP	GO:0080050	regulation of seed development	IEP	Neighborhood
MF	GO:0080097	L-tryptophan:pyruvate aminotransferase activity	IEP	Neighborhood
BP	GO:0080113	regulation of seed growth	IEP	Neighborhood
BP	GO:1900376	regulation of secondary metabolite biosynthetic process	IEP	Neighborhood
BP	GO:2000014	regulation of endosperm development	IEP	Neighborhood
BP	GO:2000029	regulation of proanthocyanidin biosynthetic process	IEP	Neighborhood
BP	GO:2000762	regulation of phenylpropanoid metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002913	START_lipid-bd_dom	259	486
IPR001356	Homeobox_dom	102	157

External Links

No external refs found!

AT1G79840 (GL2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation