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  5. Cpa|evm.model.tig00020693.6

Cpa|evm.model.tig00020693.6


Description : RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.Pfs2/FY component


Gene families : OG0005339 (Archaeplastida) Phylogenetic Tree(s): OG0005339_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020693.6
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00063p00034480 evm_27.TU.AmTr_v1... RNA processing.RNA 3-end polyadenylation.Cleavage and... 0.01 Archaeplastida
Pp3c16_16500V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.01 Archaeplastida
Solyc08g067040.4.1 No alias component Pfs2/FY of Cleavage and Polyadenylation... 0.03 Archaeplastida
Zm00001e018628_P002 No alias component Pfs2/FY of Cleavage and Polyadenylation... 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 261 298
IPR001680 WD40_repeat 110 142
IPR001680 WD40_repeat 311 341
IPR001680 WD40_repeat 219 256
IPR001680 WD40_repeat 181 214
No external refs found!