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  5. Cpa|evm.model.tig00020816.63

Cpa|evm.model.tig00020816.63


Description : RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 U5 small nuclear ribonucleoprotein particle (snRNP).PRPF3 snRNP-associated protein


Gene families : OG0005546 (Archaeplastida) Phylogenetic Tree(s): OG0005546_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020816.63
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
LOC_Os09g07500.1 No alias protein factor PRPF3 of U4/U6 small nuclear... 0.02 Archaeplastida
MA_10432248g0010 No alias protein factor PRPF3 of U4/U6 small nuclear... 0.01 Archaeplastida
Mp1g10190.1 No alias protein factor PRPF3 of U4/U6 small nuclear... 0.01 Archaeplastida
Zm00001e014268_P001 No alias protein factor PRPF3 of U4/U6 small nuclear... 0.01 Archaeplastida
Zm00001e024816_P001 No alias protein factor PRPF3 of U4/U6 small nuclear... 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR010541 DUF1115 595 730
IPR013881 Pre-mRNA_splic_Prp3 380 554
No external refs found!