Cpa|evm.model.tig00020850.3

Description : Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-I complex.VPS28 component

Gene families : OG0004378 (Archaeplastida) Phylogenetic Tree(s): OG0004378_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00020850.3
Cluster	HCCA: Cluster_6

Target	Alias	Description	ECC score	Gene Family Method
Cre16.g678100	No alias	Vesicle trafficking.endomembrane trafficking.ESCRT...	0.06	Archaeplastida
Gb_12949	No alias	component VPS28 of ESCRT-I complex	0.03	Archaeplastida
MA_10432906g0010	No alias	component VPS28 of ESCRT-I complex	0.03	Archaeplastida
Solyc03g031750.2.1	No alias	component VPS28 of ESCRT-I complex	0.01	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0000813	ESCRT I complex	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
BP	GO:0016197	endosomal transport	None	Extended
BP	GO:0032509	endosome transport via multivesicular body sorting pathway	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0036452	ESCRT complex	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044433	cytoplasmic vesicle part	None	Extended
CC	GO:0044440	endosomal part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071985	multivesicular body sorting pathway	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR007143	Vps28	177	250
IPR007143	Vps28	91	157

External Links

No external refs found!

Cpa|evm.model.tig00020850.3

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation