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  5. Cpa|evm.model.tig00020902.41

Cpa|evm.model.tig00020902.41


Description : DNA topoisomerase 6 subunit A OS=Arabidopsis thaliana


Gene families : OG0001077 (Archaeplastida) Phylogenetic Tree(s): OG0001077_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020902.41
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AT3G13170 ATSPO11-1 Spo11/DNA topoisomerase VI, subunit A protein 0.02 Archaeplastida
AT5G02820 BIN5, RHL2 Spo11/DNA topoisomerase VI, subunit A protein 0.02 Archaeplastida
Cre02.g084800 No alias DNA topoisomerase 6 subunit A OS=Arabidopsis thaliana 0.05 Archaeplastida
LOC_Os03g54091.1 No alias component a (SPO11) of meiotic topoisomerase-VI complex 0.01 Archaeplastida
MA_554103g0010 No alias Meiotic recombination protein SPO11-2 OS=Arabidopsis... 0.01 Archaeplastida
Solyc08g081590.3.1 No alias Meiotic recombination protein SPO11-2 OS=Arabidopsis... 0.01 Archaeplastida
Zm00001e012029_P003 No alias component a (SPO11) of meiotic topoisomerase-VI complex 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005694 chromosome IEA Interproscan
BP GO:0006259 DNA metabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013049 Spo11/TopoVI_A_N 125 186
No external refs found!