Cpa|evm.model.tig00020943.85


Description : DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa subsp. indica


Gene families : OG0007355 (Archaeplastida) Phylogenetic Tree(s): OG0007355_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020943.85
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AT3G16840 No alias P-loop containing nucleoside triphosphate hydrolases... 0.06 Archaeplastida
Cre01.g022350 No alias DEAD-box ATP-dependent RNA helicase 13 OS=Arabidopsis thaliana 0.14 Archaeplastida
GSVIVT01027957001 No alias DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa... 0.07 Archaeplastida
Gb_06963 No alias DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa... 0.03 Archaeplastida
LOC_Os04g43140.1 No alias DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa... 0.09 Archaeplastida
MA_10436248g0010 No alias DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa... 0.02 Archaeplastida
Mp5g03860.1 No alias DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa... 0.09 Archaeplastida
Pp3c17_22010V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 Archaeplastida
Solyc09g090740.4.1 No alias DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa... 0.06 Archaeplastida
Zm00001e007582_P001 No alias DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa... 0.16 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001650 Helicase_C 634 740
IPR011545 DEAD/DEAH_box_helicase_dom 199 383
No external refs found!