AT2G02990 (ATRNS1, RNS1)

Aliases : ATRNS1, RNS1

Description : ribonuclease 1

Gene families : OG0000815 (Archaeplastida) Phylogenetic Tree(s): OG0000815_tree ,
OG_05_0002179 (LandPlants) Phylogenetic Tree(s): OG_05_0002179_tree ,
OG_06_0002586 (SeedPlants) Phylogenetic Tree(s): OG_06_0002586_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G02990
Cluster	HCCA: Cluster_160

Target	Alias	Description	ECC score	Gene Family Method
Gb_38141	No alias	Ribonuclease 1 OS=Arabidopsis thaliana...	0.06	Archaeplastida
LOC_Os07g43600.1	No alias	Intracellular ribonuclease LX OS=Solanum lycopersicum...	0.07	Archaeplastida
MA_9272140g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_95383g0020	No alias	Ribonuclease 1 OS=Arabidopsis thaliana...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004519	endonuclease activity	None	Extended
MF	GO:0004521	endoribonuclease activity	ISS	Interproscan
MF	GO:0004540	ribonuclease activity	IDA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	IDA	Interproscan
CC	GO:0005576	extracellular region	ISM	Interproscan
CC	GO:0005618	cell wall	IDA	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0006820	anion transport	None	Extended
BP	GO:0006865	amino acid transport	RCA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007154	cell communication	None	Extended
BP	GO:0007568	aging	IEP	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009267	cellular response to starvation	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009611	response to wounding	IEP	Interproscan
BP	GO:0009718	anthocyanin-containing compound biosynthetic process	IMP	Interproscan
BP	GO:0009812	flavonoid metabolic process	None	Extended
BP	GO:0009813	flavonoid biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0009991	response to extracellular stimulus	None	Extended
BP	GO:0015711	organic anion transport	None	Extended
BP	GO:0015804	neutral amino acid transport	None	Extended
BP	GO:0015824	proline transport	RCA	Interproscan
BP	GO:0015849	organic acid transport	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016036	cellular response to phosphate starvation	IEP	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0031667	response to nutrient levels	None	Extended
BP	GO:0031668	cellular response to extracellular stimulus	None	Extended
BP	GO:0031669	cellular response to nutrient levels	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0042440	pigment metabolic process	None	Extended
BP	GO:0042594	response to starvation	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0046148	pigment biosynthetic process	None	Extended
BP	GO:0046283	anthocyanin-containing compound metabolic process	None	Extended
BP	GO:0046942	carboxylic acid transport	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071496	cellular response to external stimulus	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0006020	inositol metabolic process	IEP	Neighborhood
BP	GO:0006021	inositol biosynthetic process	IEP	Neighborhood
BP	GO:0006066	alcohol metabolic process	IEP	Neighborhood
BP	GO:0006089	lactate metabolic process	IEP	Neighborhood
BP	GO:0006643	membrane lipid metabolic process	IEP	Neighborhood
BP	GO:0006664	glycolipid metabolic process	IEP	Neighborhood
BP	GO:0006766	vitamin metabolic process	IEP	Neighborhood
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	Neighborhood
MF	GO:0008252	nucleotidase activity	IEP	Neighborhood
MF	GO:0008441	3'(2'),5'-bisphosphate nucleotidase activity	IEP	Neighborhood
MF	GO:0008509	anion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0008934	inositol monophosphate 1-phosphatase activity	IEP	Neighborhood
BP	GO:0009110	vitamin biosynthetic process	IEP	Neighborhood
BP	GO:0009247	glycolipid biosynthetic process	IEP	Neighborhood
BP	GO:0009438	methylglyoxal metabolic process	IEP	Neighborhood
BP	GO:0010264	myo-inositol hexakisphosphate biosynthetic process	IEP	Neighborhood
MF	GO:0010347	L-galactose-1-phosphate phosphatase activity	IEP	Neighborhood
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015112	nitrate transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015706	nitrate transport	IEP	Neighborhood
BP	GO:0016143	S-glycoside metabolic process	IEP	Neighborhood
BP	GO:0016144	S-glycoside biosynthetic process	IEP	Neighborhood
MF	GO:0019203	carbohydrate phosphatase activity	IEP	Neighborhood
BP	GO:0019243	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	IEP	Neighborhood
BP	GO:0019374	galactolipid metabolic process	IEP	Neighborhood
BP	GO:0019375	galactolipid biosynthetic process	IEP	Neighborhood
BP	GO:0019751	polyol metabolic process	IEP	Neighborhood
BP	GO:0019757	glycosinolate metabolic process	IEP	Neighborhood
BP	GO:0019758	glycosinolate biosynthetic process	IEP	Neighborhood
BP	GO:0019760	glucosinolate metabolic process	IEP	Neighborhood
BP	GO:0019761	glucosinolate biosynthetic process	IEP	Neighborhood
BP	GO:0019852	L-ascorbic acid metabolic process	IEP	Neighborhood
BP	GO:0019853	L-ascorbic acid biosynthetic process	IEP	Neighborhood
BP	GO:0032958	inositol phosphate biosynthetic process	IEP	Neighborhood
BP	GO:0033517	myo-inositol hexakisphosphate metabolic process	IEP	Neighborhood
BP	GO:0042180	cellular ketone metabolic process	IEP	Neighborhood
BP	GO:0042182	ketone catabolic process	IEP	Neighborhood
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	Neighborhood
BP	GO:0043647	inositol phosphate metabolic process	IEP	Neighborhood
BP	GO:0046165	alcohol biosynthetic process	IEP	Neighborhood
BP	GO:0046173	polyol biosynthetic process	IEP	Neighborhood
BP	GO:0046185	aldehyde catabolic process	IEP	Neighborhood
BP	GO:0046364	monosaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0046467	membrane lipid biosynthetic process	IEP	Neighborhood
MF	GO:0050308	sugar-phosphatase activity	IEP	Neighborhood
BP	GO:0051596	methylglyoxal catabolic process	IEP	Neighborhood
MF	GO:0052745	inositol phosphate phosphatase activity	IEP	Neighborhood
MF	GO:0052834	inositol monophosphate phosphatase activity	IEP	Neighborhood
BP	GO:0061727	methylglyoxal catabolic process to lactate	IEP	Neighborhood
MF	GO:0070456	galactose-1-phosphate phosphatase activity	IEP	Neighborhood
BP	GO:0080167	response to karrikin	IEP	Neighborhood
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	Neighborhood
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	Neighborhood
BP	GO:1901659	glycosyl compound biosynthetic process	IEP	Neighborhood
BP	GO:1903509	liposaccharide metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001568	RNase_T2-like	30	213

External Links

No external refs found!

AT2G02990 (ATRNS1, RNS1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation