Cpa|evm.model.tig00020961.28

Description : ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana

Gene families : OG0000499 (Archaeplastida) Phylogenetic Tree(s): OG0000499_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00020961.28
Cluster	HCCA: Cluster_148

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00077p00186260	evm_27.TU.AmTr_v1...	ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana	0.01	Archaeplastida
AT1G10930	ATRECQ4A, ATSGS1, RECQ4A	DNA helicase (RECQl4A)	0.01	Archaeplastida
AT3G05740	RECQI1	RECQ helicase l1	0.01	Archaeplastida
Cre04.g219750	No alias	Cell cycle.mitosis and meiosis.meiotic...	0.01	Archaeplastida
Cre12.g490150	No alias	ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01036944001	No alias	RNA biosynthesis.RNA polymerase II-dependent...	0.01	Archaeplastida
Gb_08699	No alias	ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis...	0.02	Archaeplastida
LOC_Os04g35420.1	No alias	helicase component RecQ4A of RTR Holliday junction...	0.02	Archaeplastida
LOC_Os07g48360.1	No alias	Mediator of RNA polymerase II transcription subunit 34...	0.01	Archaeplastida
MA_10436537g0010	No alias	helicase component RecQ4A of RTR Holliday junction...	0.03	Archaeplastida
MA_30494g0010	No alias	ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis...	0.02	Archaeplastida
Mp4g14290.1	No alias	helicase component RecQ4A of RTR Holliday junction...	0.02	Archaeplastida
Mp4g16510.1	No alias	ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis...	0.01	Archaeplastida
Pp3c2_1760V3.1	No alias	RECQ helicase L4B	0.02	Archaeplastida
Solyc01g100280.4.1	No alias	ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis...	0.03	Archaeplastida
Solyc08g074600.4.1	No alias	component MED34 of MEDIATOR transcription co-activator complex	0.01	Archaeplastida
Zm00001e035873_P003	No alias	ATP-dependent DNA helicase Q-like 4B OS=Arabidopsis...	0.01	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003678	DNA helicase activity	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004003	ATP-dependent DNA helicase activity	None	Extended
MF	GO:0004386	helicase activity	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	IEA	Interproscan
BP	GO:0006281	DNA repair	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
MF	GO:0008026	ATP-dependent helicase activity	None	Extended
MF	GO:0008094	DNA-dependent ATPase activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0042623	ATPase activity, coupled	None	Extended
MF	GO:0043138	3'-5' DNA helicase activity	None	Extended
MF	GO:0043140	ATP-dependent 3'-5' DNA helicase activity	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
MF	GO:0070035	purine NTP-dependent helicase activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	39	199
IPR002121	HRDC_dom	553	618
IPR018982	RQC_domain	400	493
IPR029491	Helicase_HTH	660	735
IPR001650	Helicase_C	244	343

External Links

No external refs found!

Cpa|evm.model.tig00020961.28

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation