AT2G03340 (WRKY3)

Aliases : WRKY3

Description : WRKY DNA-binding protein 3

Gene families : OG0000007 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000250 (LandPlants) Phylogenetic Tree(s): OG_05_0000250_tree ,
OG_06_0002852 (SeedPlants) Phylogenetic Tree(s): OG_06_0002852_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G03340
Cluster	HCCA: Cluster_3

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00061p00050690	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01012196001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01026969001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
GSVIVT01030046001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.05	Archaeplastida
Gb_05026	No alias	transcription factor (WRKY)	0.05	Archaeplastida
Gb_16513	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Gb_26413	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Gb_31953	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os01g40260.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os01g53040.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os01g60490.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os02g43560.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os02g53100.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os04g46060.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
LOC_Os05g40080.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os06g44010.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Pp3c14_17020V3.1	No alias	WRKY DNA-binding protein 7	0.01	Archaeplastida
Pp3c8_4400V3.1	No alias	WRKY DNA-binding protein 2	0.01	Archaeplastida
Solyc07g066220.3.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc12g096350.2.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e007070_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e007834_P002	No alias	transcription factor (WRKY)	0.09	Archaeplastida
Zm00001e014245_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e015292_P001	No alias	No annotation	0.06	Archaeplastida
Zm00001e041561_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
BP	GO:0009737	response to abscisic acid	IEP	Neighborhood
BP	GO:0009739	response to gibberellin	IEP	Neighborhood
BP	GO:0010029	regulation of seed germination	IEP	Neighborhood
BP	GO:0010229	inflorescence development	IEP	Neighborhood
CC	GO:0012505	endomembrane system	IEP	Neighborhood
MF	GO:0030276	clathrin binding	IEP	Neighborhood
BP	GO:0033993	response to lipid	IEP	Neighborhood
MF	GO:0042803	protein homodimerization activity	IEP	Neighborhood
MF	GO:0046982	protein heterodimerization activity	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood
CC	GO:0080008	Cul4-RING E3 ubiquitin ligase complex	IEP	Neighborhood
BP	GO:0090567	reproductive shoot system development	IEP	Neighborhood
BP	GO:0097305	response to alcohol	IEP	Neighborhood
BP	GO:1900140	regulation of seedling development	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	415	472
IPR003657	WRKY_dom	250	306

External Links

No external refs found!

AT2G03340 (WRKY3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation