Cpa|evm.model.tig00021108.9

No description available

Gene families : OG0004366 (Archaeplastida) Phylogenetic Tree(s): OG0004366_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00021108.9
Cluster	HCCA: Cluster_40

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00046p00229090	evm_27.TU.AmTr_v1...	No description available	0.04	Archaeplastida
AT5G64420	No alias	DNA polymerase V family	0.1	Archaeplastida
Cre01.g012350	No alias	No description available	0.12	Archaeplastida
GSVIVT01038520001	No alias	No description available	0.06	Archaeplastida
Gb_40438	No alias	no hits & (original description: none)	0.01	Archaeplastida
LOC_Os02g04270.1	No alias	no hits & (original description: none)	0.11	Archaeplastida
Mp5g07000.1	No alias	no hits & (original description: none)	0.11	Archaeplastida
Pp3c13_11570V3.1	No alias	DNA polymerase V family	0.1	Archaeplastida
Pp3c3_9940V3.1	No alias	DNA polymerase V family	0.02	Archaeplastida
Smo438609	No alias	No description available	0.02	Archaeplastida
Solyc01g106220.4.1	No alias	no hits & (original description: none)	0.08	Archaeplastida
Zm00001e013596_P001	No alias	no hits & (original description: none)	0.08	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005730	nucleolus	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
MF	GO:0008134	transcription factor binding	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044428	nuclear part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR007015	DNA_pol_V	687	812
IPR007015	DNA_pol_V	75	262
IPR007015	DNA_pol_V	272	387

External Links

No external refs found!

Cpa|evm.model.tig00021108.9

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation