Cpa|evm.model.tig00021127.5

Description : RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.SPT20/ADA5 component

Gene families : OG0005278 (Archaeplastida) Phylogenetic Tree(s): OG0005278_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00021127.5
Cluster	HCCA: Cluster_173

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os10g25200.1	No alias	component SPT20/ADA5 of SAGA transcription co-activator complex	0.02	Archaeplastida
MA_10436298g0010	No alias	component SPT20/ADA5 of SAGA transcription co-activator complex	0.01	Archaeplastida
MA_10436398g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_114383g0010	No alias	component SPT20/ADA5 of SAGA transcription co-activator complex	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0000123	histone acetyltransferase complex	None	Extended
CC	GO:0000124	SAGA complex	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003712	transcription coregulator activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0031248	protein acetyltransferase complex	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044428	nuclear part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044451	nucleoplasm part	None	Extended
CC	GO:0044464	cell part	None	Extended
CC	GO:0070461	SAGA-type complex	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
CC	GO:1902493	acetyltransferase complex	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1905368	peptidase complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR021950	Spt20	275	345
IPR021950	Spt20	202	272

External Links

No external refs found!