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  5. Cpa|evm.model.tig00021168.21

Cpa|evm.model.tig00021168.21


Description : RNA processing.RNA modification.rRNA/tRNA methylation.TRM1 tRNA guanosine-methyltransferase


Gene families : OG0003798 (Archaeplastida) Phylogenetic Tree(s): OG0003798_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021168.21
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AT5G15810 No alias N2,N2-dimethylguanosine tRNA methyltransferase 0.02 Archaeplastida
Cre10.g422000 No alias RNA processing.RNA modification.rRNA/tRNA... 0.12 Archaeplastida
GSVIVT01036556001 No alias RNA processing.RNA modification.rRNA/tRNA... 0.03 Archaeplastida
Gb_38019 No alias Probable tRNA (guanine(26)-N(2))-dimethyltransferase 1... 0.02 Archaeplastida
LOC_Os03g57280.1 No alias tRNA guanosine-methyltransferase (TRM1) 0.05 Archaeplastida
LOC_Os10g21360.1 No alias tRNA guanosine-methyltransferase (TRM1) 0.01 Archaeplastida
MA_10428339g0010 No alias tRNA guanosine-methyltransferase (TRM1) 0.06 Archaeplastida
MA_5280g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
Mp1g00640.1 No alias tRNA guanosine-methyltransferase (TRM1) 0.11 Archaeplastida
Pp3c16_12880V3.1 No alias N2,N2-dimethylguanosine tRNA methyltransferase 0.08 Archaeplastida
Smo153186 No alias RNA processing.RNA modification.rRNA/tRNA... 0.03 Archaeplastida
Solyc02g089175.2.1 No alias tRNA guanosine-methyltransferase (TRM1) 0.04 Archaeplastida
Zm00001e001206_P005 No alias tRNA guanosine-methyltransferase (TRM1) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEA Interproscan
BP GO:0008033 tRNA processing IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002905 Trm1 24 488
No external refs found!