AT2G06020

Description : Homeodomain-like superfamily protein

Gene families : OG0000027 (Archaeplastida) Phylogenetic Tree(s): OG0000027_tree ,
OG_05_0046456 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0041093 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G06020
Cluster	HCCA: Cluster_15

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00044p00042560	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.05	Archaeplastida
AT4G17695	KAN3	Homeodomain-like superfamily protein	0.03	Archaeplastida
GSVIVT01012707001	No alias	No description available	0.03	Archaeplastida
GSVIVT01021072001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
GSVIVT01021225001	No alias	Putative Myb family transcription factor At1g14600...	0.04	Archaeplastida
GSVIVT01036717001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
Gb_17469	No alias	G2-like GARP transcription factor	0.03	Archaeplastida
Gb_25991	No alias	G2-like GARP transcription factor	0.04	Archaeplastida
Gb_27262	No alias	G2-like GARP transcription factor	0.03	Archaeplastida
Gb_40510	No alias	G2-like GARP transcription factor	0.03	Archaeplastida
LOC_Os03g21240.1	No alias	PHR1 transcription factor involved in proline synthesis...	0.02	Archaeplastida
LOC_Os05g40960.1	No alias	G2-like GARP transcription factor	0.03	Archaeplastida
LOC_Os11g01480.1	No alias	Putative Myb family transcription factor At1g14600...	0.04	Archaeplastida
LOC_Os12g01490.1	No alias	Putative Myb family transcription factor At1g14600...	0.04	Archaeplastida
MA_28188g0010	No alias	G2-like GARP transcription factor	0.03	Archaeplastida
MA_8183372g0010	No alias	G2-like GARP transcription factor	0.02	Archaeplastida
Pp3c12_11150V3.1	No alias	myb-like HTH transcriptional regulator family protein	0.02	Archaeplastida
Pp3c1_41530V3.1	No alias	Homeodomain-like superfamily protein	0.03	Archaeplastida
Pp3c7_20870V3.1	No alias	myb-like HTH transcriptional regulator family protein	0.03	Archaeplastida
Pp3c8_16910V3.1	No alias	Homeodomain-like superfamily protein	0.03	Archaeplastida
Solyc02g080730.2.1	No alias	G2-like GARP transcription factor	0.04	Archaeplastida
Solyc02g080740.3.1	No alias	G2-like GARP transcription factor	0.04	Archaeplastida
Solyc06g066180.4.1	No alias	G2-like GARP transcription factor	0.03	Archaeplastida
Solyc08g005260.2.1	No alias	G2-like GARP transcription factor	0.03	Archaeplastida
Zm00001e009294_P001	No alias	Putative Myb family transcription factor At1g14600...	0.03	Archaeplastida
Zm00001e014339_P001	No alias	Putative Myb family transcription factor At1g14600...	0.02	Archaeplastida
Zm00001e030689_P002	No alias	G2-like GARP transcription factor	0.03	Archaeplastida
Zm00001e035893_P001	No alias	G2-like GARP transcription factor	0.02	Archaeplastida
Zm00001e037731_P001	No alias	G2-like GARP transcription factor	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005199	structural constituent of cell wall	IEP	Neighborhood
BP	GO:0005985	sucrose metabolic process	IEP	Neighborhood
BP	GO:0005986	sucrose biosynthetic process	IEP	Neighborhood
BP	GO:0006869	lipid transport	IEP	Neighborhood
BP	GO:0009308	amine metabolic process	IEP	Neighborhood
BP	GO:0009690	cytokinin metabolic process	IEP	Neighborhood
MF	GO:0009824	AMP dimethylallyltransferase activity	IEP	Neighborhood
BP	GO:0009845	seed germination	IEP	Neighborhood
BP	GO:0009903	chloroplast avoidance movement	IEP	Neighborhood
BP	GO:0010030	positive regulation of seed germination	IEP	Neighborhood
BP	GO:0010162	seed dormancy process	IEP	Neighborhood
BP	GO:0010817	regulation of hormone levels	IEP	Neighborhood
MF	GO:0016157	sucrose synthase activity	IEP	Neighborhood
BP	GO:0022611	dormancy process	IEP	Neighborhood
BP	GO:0034754	cellular hormone metabolic process	IEP	Neighborhood
BP	GO:0042214	terpene metabolic process	IEP	Neighborhood
BP	GO:0042445	hormone metabolic process	IEP	Neighborhood
BP	GO:0046246	terpene biosynthetic process	IEP	Neighborhood
BP	GO:0048609	multicellular organismal reproductive process	IEP	Neighborhood
MF	GO:0052622	ATP dimethylallyltransferase activity	IEP	Neighborhood
MF	GO:0052623	ADP dimethylallyltransferase activity	IEP	Neighborhood
MF	GO:0080030	methyl indole-3-acetate esterase activity	IEP	Neighborhood
MF	GO:0080032	methyl jasmonate esterase activity	IEP	Neighborhood
BP	GO:0080050	regulation of seed development	IEP	Neighborhood
MF	GO:0080072	spermidine:sinapoyl CoA N-acyltransferase activity	IEP	Neighborhood
MF	GO:0080089	sinapoyl spermidine:sinapoyl CoA N-acyltransferase activity	IEP	Neighborhood
BP	GO:2000034	regulation of seed maturation	IEP	Neighborhood

No InterPro domains available for this sequence

External Links

No external refs found!

AT2G06020

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation