Cpa|evm.model.tig00021351.15

Description : RNA processing.RNA quality control Exon Junction complex (EJC).core components.Y14 component

Gene families : OG0004338 (Archaeplastida) Phylogenetic Tree(s): OG0004338_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00021351.15
Cluster	HCCA: Cluster_71

Target	Alias	Description	ECC score	Gene Family Method
Cre12.g526750	No alias	RNA processing.RNA quality control Exon Junction complex...	0.09	Archaeplastida
GSVIVT01026504001	No alias	RNA processing.RNA quality control Exon Junction complex...	0.02	Archaeplastida
LOC_Os05g04850.1	No alias	component Y14 of RNA quality control Exon Junction complex	0.03	Archaeplastida
Mp5g04230.1	No alias	component Y14 of RNA quality control Exon Junction complex	0.04	Archaeplastida
Pp3c11_21740V3.1	No alias	RNA-binding (RRM/RBD/RNP motifs) family protein	0.02	Archaeplastida
Pp3c7_3000V3.1	No alias	RNA-binding (RRM/RBD/RNP motifs) family protein	0.03	Archaeplastida
Smo100512	No alias	RNA processing.RNA quality control Exon Junction complex...	0.02	Archaeplastida
Solyc06g065470.4.1	No alias	component Y14 of RNA quality control Exon Junction complex	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	81	129

External Links

No external refs found!