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  5. AT2G13610

AT2G13610


Description : ABC-2 type transporter family protein


Gene families : OG0001052 (Archaeplastida) Phylogenetic Tree(s): OG0001052_tree ,
OG_05_0001355 (LandPlants) Phylogenetic Tree(s): OG_05_0001355_tree ,
OG_06_0001266 (SeedPlants) Phylogenetic Tree(s): OG_06_0001266_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G13610
Cluster HCCA: Cluster_264

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00031p00236610 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.04 Archaeplastida
AT5G19410 No alias ABC-2 type transporter family protein 0.04 Archaeplastida
GSVIVT01014222001 No alias ABC transporter G family member 10 OS=Arabidopsis thaliana 0.07 Archaeplastida
GSVIVT01022346001 No alias ABC transporter G family member 5 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01037274001 No alias Solute transport.primary active transport.ABC... 0.07 Archaeplastida
Gb_24085 No alias subfamily ABCG transporter 0.03 Archaeplastida
LOC_Os01g42900.1 No alias subfamily ABCG transporter 0.04 Archaeplastida
MA_103974g0010 No alias ABC transporter G family member 5 OS=Arabidopsis... 0.03 Archaeplastida
MA_10426701g0030 No alias subfamily ABCG transporter 0.05 Archaeplastida
Mp1g25240.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Mp5g04860.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Mp5g05620.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Pp3c18_7000V3.1 No alias ABC-2 type transporter family protein 0.04 Archaeplastida
Pp3c18_7010V3.1 No alias ABC-2 type transporter family protein 0.04 Archaeplastida
Pp3c22_15560V3.1 No alias ABC-2 type transporter family protein 0.03 Archaeplastida
Pp3c22_15570V3.1 No alias ABC-2 type transporter family protein 0.04 Archaeplastida
Pp3c26_3590V3.1 No alias ABC-2 type transporter family protein 0.06 Archaeplastida
Pp3c3_34730V3.1 No alias ABC-2 type transporter family protein 0.06 Archaeplastida
Smo88976 No alias Solute transport.primary active transport.ABC... 0.05 Archaeplastida
Solyc03g113690.1.1 No alias subfamily ABCG transporter 0.05 Archaeplastida
Solyc05g056470.1.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Solyc07g053300.1.1 No alias subfamily ABCG transporter 0.05 Archaeplastida
Zm00001e031556_P001 No alias subfamily ABCG transporter 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0010103 stomatal complex morphogenesis RCA Interproscan
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0001872 (1->3)-beta-D-glucan binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003725 double-stranded RNA binding IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004560 alpha-L-fucosidase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0006949 syncytium formation IEP Neighborhood
BP GO:0007000 nucleolus organization IEP Neighborhood
BP GO:0007389 pattern specification process IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0008356 asymmetric cell division IEP Neighborhood
BP GO:0008361 regulation of cell size IEP Neighborhood
BP GO:0009786 regulation of asymmetric cell division IEP Neighborhood
BP GO:0009790 embryo development IEP Neighborhood
BP GO:0009793 embryo development ending in seed dormancy IEP Neighborhood
BP GO:0009825 multidimensional cell growth IEP Neighborhood
BP GO:0009886 post-embryonic animal morphogenesis IEP Neighborhood
BP GO:0009913 epidermal cell differentiation IEP Neighborhood
BP GO:0009914 hormone transport IEP Neighborhood
BP GO:0009926 auxin polar transport IEP Neighborhood
CC GO:0009986 cell surface IEP Neighborhood
BP GO:0010015 root morphogenesis IEP Neighborhood
BP GO:0010075 regulation of meristem growth IEP Neighborhood
BP GO:0010091 trichome branching IEP Neighborhood
BP GO:0010143 cutin biosynthetic process IEP Neighborhood
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP Neighborhood
BP GO:0010267 production of ta-siRNAs involved in RNA interference IEP Neighborhood
MF GO:0010385 double-stranded methylated DNA binding IEP Neighborhood
MF GO:0015928 fucosidase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
MF GO:0016713 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
MF GO:0018685 alkane 1-monooxygenase activity IEP Neighborhood
MF GO:0019199 transmembrane receptor protein kinase activity IEP Neighborhood
CC GO:0030139 endocytic vesicle IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0030422 production of siRNA involved in RNA interference IEP Neighborhood
BP GO:0030855 epithelial cell differentiation IEP Neighborhood
BP GO:0031050 dsRNA fragmentation IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
BP GO:0032989 cellular component morphogenesis IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0035196 production of miRNAs involved in gene silencing by miRNA IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
BP GO:0043473 pigmentation IEP Neighborhood
BP GO:0043476 pigment accumulation IEP Neighborhood
BP GO:0043478 pigment accumulation in response to UV light IEP Neighborhood
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP Neighborhood
BP GO:0043480 pigment accumulation in tissues IEP Neighborhood
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
BP GO:0043966 histone H3 acetylation IEP Neighborhood
BP GO:0043971 histone H3-K18 acetylation IEP Neighborhood
BP GO:0043972 histone H3-K23 acetylation IEP Neighborhood
BP GO:0044030 regulation of DNA methylation IEP Neighborhood
BP GO:0044154 histone H3-K14 acetylation IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
MF GO:0045551 cinnamyl-alcohol dehydrogenase activity IEP Neighborhood
BP GO:0045596 negative regulation of cell differentiation IEP Neighborhood
CC GO:0046658 anchored component of plasma membrane IEP Neighborhood
BP GO:0048366 leaf development IEP Neighborhood
BP GO:0048367 shoot system development IEP Neighborhood
BP GO:0048481 plant ovule development IEP Neighborhood
BP GO:0048497 maintenance of floral organ identity IEP Neighborhood
BP GO:0048507 meristem development IEP Neighborhood
BP GO:0048509 regulation of meristem development IEP Neighborhood
BP GO:0048638 regulation of developmental growth IEP Neighborhood
BP GO:0048731 system development IEP Neighborhood
BP GO:0048767 root hair elongation IEP Neighborhood
BP GO:0048825 cotyledon development IEP Neighborhood
BP GO:0048827 phyllome development IEP Neighborhood
BP GO:0048829 root cap development IEP Neighborhood
BP GO:0048831 regulation of shoot system development IEP Neighborhood
BP GO:0048869 cellular developmental process IEP Neighborhood
BP GO:0050793 regulation of developmental process IEP Neighborhood
BP GO:0051301 cell division IEP Neighborhood
BP GO:0051607 defense response to virus IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood
BP GO:0060918 auxin transport IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0070918 production of small RNA involved in gene silencing by RNA IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0080188 RNA-directed DNA methylation IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
BP GO:0090700 maintenance of plant organ identity IEP Neighborhood
BP GO:0099402 plant organ development IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 63 211
IPR013525 ABC_2_trans 373 581
No external refs found!