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  5. Cpa|evm.model.tig00021720.13

Cpa|evm.model.tig00021720.13


Description : RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.CEN centrin component


Gene families : OG0000031 (Archaeplastida) Phylogenetic Tree(s): OG0000031_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021720.13
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00073390 evm_27.TU.AmTr_v1... Calmodulin OS=Solanum lycopersicum 0.02 Archaeplastida
AT1G66410 ACAM-4, CAM4 calmodulin 4 0.02 Archaeplastida
AT2G41110 ATCAL5, CAM2 calmodulin 2 0.01 Archaeplastida
AT3G43810 CAM7 calmodulin 7 0.02 Archaeplastida
AT4G12860 UNE14 EF hand calcium-binding protein family 0.01 Archaeplastida
AT5G37780 TCH1, CAM1, ACAM-1 calmodulin 1 0.03 Archaeplastida
Cre03.g178150 No alias Calmodulin OS=Chlamydomonas reinhardtii 0.02 Archaeplastida
LOC_Os01g16240.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.01 Archaeplastida
LOC_Os01g17190.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.02 Archaeplastida
LOC_Os03g20370.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.02 Archaeplastida
LOC_Os05g41210.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.02 Archaeplastida
Mp1g00710.1 No alias DNA repair protein (CEN2). centrin component CEN of... 0.01 Archaeplastida
Pp3c24_2030V3.1 No alias calmodulin 5 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 499 562
IPR002048 EF_hand_dom 426 488
No external refs found!