- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Reticulon family protein
Gene families : OG0000225 (Archaeplastida) Phylogenetic Tree(s): OG0000225_tree ,
OG_05_0000137 (LandPlants) Phylogenetic Tree(s): OG_05_0000137_tree ,
OG_06_0001141 (SeedPlants) Phylogenetic Tree(s): OG_06_0001141_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT2G15280 | |
| Cluster | HCCA: Cluster_252 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| LOC_Os01g53520.1 | No alias | ER-associated protein (Reticulon) | 0.03 | Archaeplastida | |
| LOC_Os03g56900.1 | No alias | ER-associated protein (Reticulon) | 0.03 | Archaeplastida | |
| Solyc10g011870.3.1 | No alias | ER-associated protein (Reticulon) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005739 | mitochondrion | ISM | Interproscan |
| CC | GO:0005783 | endoplasmic reticulum | ISS | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000003 | reproduction | IEP | Neighborhood |
| BP | GO:0001944 | vasculature development | IEP | Neighborhood |
| MF | GO:0005215 | transporter activity | IEP | Neighborhood |
| MF | GO:0005338 | nucleotide-sugar transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0005354 | galactose transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0006007 | glucose catabolic process | IEP | Neighborhood |
| BP | GO:0006555 | methionine metabolic process | IEP | Neighborhood |
| MF | GO:0008477 | purine nucleosidase activity | IEP | Neighborhood |
| MF | GO:0008930 | methylthioadenosine nucleosidase activity | IEP | Neighborhood |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0009086 | methionine biosynthetic process | IEP | Neighborhood |
| MF | GO:0015144 | carbohydrate transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015145 | monosaccharide transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015149 | hexose transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0015780 | nucleotide-sugar transmembrane transport | IEP | Neighborhood |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | Neighborhood |
| MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | Neighborhood |
| BP | GO:0019320 | hexose catabolic process | IEP | Neighborhood |
| BP | GO:0019509 | L-methionine salvage from methylthioadenosine | IEP | Neighborhood |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0043102 | amino acid salvage | IEP | Neighborhood |
| BP | GO:0046365 | monosaccharide catabolic process | IEP | Neighborhood |
| MF | GO:0051119 | sugar transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0071265 | L-methionine biosynthetic process | IEP | Neighborhood |
| BP | GO:0071267 | L-methionine salvage | IEP | Neighborhood |
| BP | GO:1901264 | carbohydrate derivative transport | IEP | Neighborhood |
| MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003388 | Reticulon | 14 | 168 |
| No external refs found! |