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  5. Gb_00459

Gb_00459


Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 80.5)


Gene families : OG0001961 (Archaeplastida) Phylogenetic Tree(s): OG0001961_tree ,
OG_05_0001392 (LandPlants) Phylogenetic Tree(s): OG_05_0001392_tree ,
OG_06_0002022 (SeedPlants) Phylogenetic Tree(s): OG_06_0002022_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_00459
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Gb_00615 No alias no hits & (original description: none) 0.16 Archaeplastida
Gb_01149 No alias no hits & (original description: none) 0.15 Archaeplastida
Gb_04067 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.15 Archaeplastida
Gb_04494 No alias no hits & (original description: none) 0.26 Archaeplastida
Gb_04577 No alias no hits & (original description: none) 0.24 Archaeplastida
Gb_05244 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.17 Archaeplastida
Gb_07068 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.25 Archaeplastida
Gb_09057 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.24 Archaeplastida
Gb_19969 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 Archaeplastida
Gb_20124 No alias no hits & (original description: none) 0.27 Archaeplastida
Gb_23779 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Gb_28548 No alias no hits & (original description: none) 0.2 Archaeplastida
Gb_30111 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.16 Archaeplastida
Gb_38102 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.19 Archaeplastida
Gb_39166 No alias no hits & (original description: none) 0.19 Archaeplastida
Gb_39569 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 Archaeplastida
Gb_40075 No alias no hits & (original description: none) 0.12 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025724 GAG-pre-integrase_dom 133 200
No external refs found!