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  5. Gb_00676

Gb_00676


Description : component PWR of HDA9-PWR deacetylation complex


Gene families : OG0002623 (Archaeplastida) Phylogenetic Tree(s): OG0002623_tree ,
OG_05_0003107 (LandPlants) Phylogenetic Tree(s): OG_05_0003107_tree ,
OG_06_0005880 (SeedPlants) Phylogenetic Tree(s): OG_06_0005880_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_00676
Cluster HCCA: Cluster_312

Target Alias Description ECC score Gene Family Method Actions
AT3G52250 No alias Duplicated homeodomain-like superfamily protein 0.02 Archaeplastida
Cre06.g264400 No alias Chromatin organisation.histone modifications.histone... 0.01 Archaeplastida
LOC_Os05g03550.1 No alias component PWR of HDA9-PWR deacetylation complex 0.04 Archaeplastida
MA_10428429g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_14319g0010 No alias component PWR of HDA9-PWR deacetylation complex 0.02 Archaeplastida
MA_9049830g0010 No alias component PWR of HDA9-PWR deacetylation complex 0.04 Archaeplastida
Mp1g21450.1 No alias component PWR of HDA9-PWR deacetylation complex 0.03 Archaeplastida
Pp3c11_8790V3.1 No alias Duplicated homeodomain-like superfamily protein 0.05 Archaeplastida
Pp3c4_7100V3.1 No alias Duplicated homeodomain-like superfamily protein 0.04 Archaeplastida
Pp3c7_16800V3.1 No alias Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
Solyc04g049120.4.1 No alias component PWR of HDA9-PWR deacetylation complex 0.03 Archaeplastida
Zm00001e027573_P003 No alias component PWR of HDA9-PWR deacetylation complex 0.04 Archaeplastida
Zm00001e029482_P006 No alias component PWR of HDA9-PWR deacetylation complex 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000176 nuclear exosome (RNase complex) IEP Neighborhood
CC GO:0000178 exosome (RNase complex) IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
CC GO:1905354 exoribonuclease complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 1148 1189
No external refs found!