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  5. Gb_01484

Gb_01484


Description : transcription factor (WOX)


Gene families : OG0000425 (Archaeplastida) Phylogenetic Tree(s): OG0000425_tree ,
OG_05_0000212 (LandPlants) Phylogenetic Tree(s): OG_05_0000212_tree ,
OG_06_0000309 (SeedPlants) Phylogenetic Tree(s): OG_06_0000309_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_01484
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00051p00020930 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
GSVIVT01016360001 No alias RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
LOC_Os07g48560.1 No alias transcription factor (WOX) 0.03 Archaeplastida
LOC_Os08g14400.1 No alias transcription factor (WOX) 0.03 Archaeplastida
MA_33318g0010 No alias transcription factor (WOX) 0.02 Archaeplastida
Solyc03g118770.4.1 No alias transcription factor (WOX) 0.03 Archaeplastida
Solyc06g072890.3.1 No alias transcription factor (WOX) 0.08 Archaeplastida
Solyc06g075567.1.1 No alias transcription factor (WOX) 0.05 Archaeplastida
Solyc11g072770.2.1 No alias transcription factor (WOX) 0.06 Archaeplastida
Solyc11g072790.2.1 No alias transcription factor (WOX) 0.02 Archaeplastida
Zm00001e009121_P001 No alias transcription factor (WOX) 0.02 Archaeplastida
Zm00001e024169_P001 No alias transcription factor (WOX) 0.03 Archaeplastida
Zm00001e028720_P001 No alias transcription factor (WOX) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 43 102
No external refs found!