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  5. Gb_02193

Gb_02193


Description : Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana (sp|q9zt94|polr2_arath : 144.0)


Gene families : OG0008174 (Archaeplastida) Phylogenetic Tree(s): OG0008174_tree ,
OG_05_0006751 (LandPlants) Phylogenetic Tree(s): OG_05_0006751_tree ,
OG_06_0004287 (SeedPlants) Phylogenetic Tree(s): OG_06_0004287_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_02193
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Gb_02582 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.11 Archaeplastida
Gb_03168 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.07 Archaeplastida
Gb_05806 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.19 Archaeplastida
Gb_06482 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.18 Archaeplastida
Gb_09478 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.12 Archaeplastida
Gb_13670 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.11 Archaeplastida
Gb_16607 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.06 Archaeplastida
Gb_16840 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.1 Archaeplastida
Gb_20284 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.14 Archaeplastida
Gb_24710 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.17 Archaeplastida
Gb_27668 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.24 Archaeplastida
Gb_27775 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.06 Archaeplastida
Gb_30803 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.08 Archaeplastida
Gb_32480 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.11 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!