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  5. AT2G17310

AT2G17310 (SON1)


Aliases : SON1

Description : F-box and associated interaction domains-containing protein


Gene families : OG0005759 (Archaeplastida) Phylogenetic Tree(s): OG0005759_tree ,
OG_05_0003903 (LandPlants) Phylogenetic Tree(s): OG_05_0003903_tree ,
OG_06_0002488 (SeedPlants) Phylogenetic Tree(s): OG_06_0002488_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G17310
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
AT1G32430 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT1G47390 No alias F-box and associated interaction domains-containing protein 0.08 Archaeplastida
AT1G51290 No alias F-box and associated interaction domains-containing protein 0.08 Archaeplastida
AT1G58090 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT1G59630 No alias F-box associated ubiquitination effector family protein 0.04 Archaeplastida
AT1G77650 No alias F-box associated ubiquitination effector family protein 0.05 Archaeplastida
AT2G14710 No alias F-box family protein 0.1 Archaeplastida
AT3G16580 No alias F-box and associated interaction domains-containing protein 0.1 Archaeplastida
AT3G16590 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT3G59590 No alias jacalin lectin family protein 0.09 Archaeplastida
AT3G59610 No alias F-box family protein / jacalin lectin family protein 0.1 Archaeplastida
AT5G37040 No alias F-box family protein 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0009617 response to bacterium IMP Interproscan
BP GO:0009620 response to fungus IMP Interproscan
BP GO:0016567 protein ubiquitination ISS Interproscan
CC GO:0019005 SCF ubiquitin ligase complex ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity IEP Neighborhood
MF GO:0003883 CTP synthase activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0009299 mRNA transcription IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
CC GO:0031350 intrinsic component of plastid membrane IEP Neighborhood
CC GO:0031351 integral component of plastid membrane IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR006527 F-box-assoc_dom_typ1 199 361
IPR001810 F-box_dom 3 37
No external refs found!