Gb_02231

Description : RNA editing factor (MEF19)

Gene families : OG0030900 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0028774 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0027155 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_02231
Cluster	HCCA: Cluster_257

Target	Alias	Description	ECC score	Gene Family Method	Actions
MA_68084g0010	No alias	Pentatricopeptide repeat-containing protein At1g11290,...	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003743	translation initiation factor activity	IEP	Neighborhood
MF	GO:0004222	metalloendopeptidase activity	IEP	Neighborhood
BP	GO:0006397	mRNA processing	IEP	Neighborhood
MF	GO:0008237	metallopeptidase activity	IEP	Neighborhood
MF	GO:0051082	unfolded protein binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	450	496
IPR002885	Pentatricopeptide_repeat	349	395
IPR002885	Pentatricopeptide_repeat	248	295
IPR002885	Pentatricopeptide_repeat	147	194
IPR002885	Pentatricopeptide_repeat	593	619
IPR002885	Pentatricopeptide_repeat	525	548
IPR032867	DYW_dom	623	747

External Links

No external refs found!

Gb_02231

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation