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  5. Gb_02289

Gb_02289


Description : component RPS3a of SSU proteome


Gene families : OG0001983 (Archaeplastida) Phylogenetic Tree(s): OG0001983_tree ,
OG_05_0001683 (LandPlants) Phylogenetic Tree(s): OG_05_0001683_tree ,
OG_06_0002405 (SeedPlants) Phylogenetic Tree(s): OG_06_0002405_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_02289
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00271660 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.14 Archaeplastida
AMTR_s00026p00042160 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 Archaeplastida
AT3G04840 No alias Ribosomal protein S3Ae 0.22 Archaeplastida
AT4G34670 No alias Ribosomal protein S3Ae 0.14 Archaeplastida
Cpa|evm.model.tig00020710.39 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.17 Archaeplastida
Cre13.g568650 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.21 Archaeplastida
GSVIVT01018024001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 Archaeplastida
GSVIVT01021836001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.27 Archaeplastida
LOC_Os02g18550.1 No alias component RPS3a of SSU proteome 0.07 Archaeplastida
LOC_Os03g10340.1 No alias component RPS3a of SSU proteome 0.12 Archaeplastida
LOC_Os12g21798.1 No alias component RPS3a of SSU proteome 0.12 Archaeplastida
MA_124901g0010 No alias component RPS3a of SSU proteome 0.11 Archaeplastida
MA_31004g0010 No alias component RPS3a of SSU proteome 0.22 Archaeplastida
Mp6g02810.1 No alias component RPS3a of SSU proteome 0.26 Archaeplastida
Pp3c11_17260V3.1 No alias Ribosomal protein S3Ae 0.1 Archaeplastida
Pp3c12_18590V3.1 No alias Ribosomal protein S3Ae 0.08 Archaeplastida
Pp3c18_2090V3.1 No alias Ribosomal protein S3Ae 0.21 Archaeplastida
Pp3c21_21510V3.1 No alias Ribosomal protein S3Ae 0.21 Archaeplastida
Pp3c22_18300V3.1 No alias Ribosomal protein S3Ae 0.09 Archaeplastida
Pp3c4_14160V3.1 No alias Ribosomal protein S3Ae 0.12 Archaeplastida
Smo160008 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 Archaeplastida
Smo271906 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.08 Archaeplastida
Smo271907 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 Archaeplastida
Solyc03g097900.3.1 No alias component RPS3a of SSU proteome 0.14 Archaeplastida
Solyc06g072490.3.1 No alias component RPS3a of SSU proteome 0.2 Archaeplastida
Solyc09g082520.3.1 No alias component RPS3a of SSU proteome 0.07 Archaeplastida
Zm00001e000767_P001 No alias No annotation 0.07 Archaeplastida
Zm00001e038777_P001 No alias component RPS3a of SSU proteome 0.11 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR001593 Ribosomal_S3Ae 47 253
No external refs found!