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Gb_02946


Description : transcriptional co-repressor (LUG)


Gene families : OG0000691 (Archaeplastida) Phylogenetic Tree(s): OG0000691_tree ,
OG_05_0000885 (LandPlants) Phylogenetic Tree(s): OG_05_0000885_tree ,
OG_06_0001501 (SeedPlants) Phylogenetic Tree(s): OG_06_0001501_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_02946
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
AT2G32700 LUH LEUNIG_homolog 0.03 Archaeplastida
GSVIVT01015458001 No alias RNA biosynthesis.transcriptional repression.LUG... 0.03 Archaeplastida
GSVIVT01035791001 No alias RNA biosynthesis.transcriptional repression.LUG... 0.03 Archaeplastida
LOC_Os01g08190.1 No alias transcriptional co-repressor (LUG) 0.02 Archaeplastida
LOC_Os01g42260.1 No alias transcriptional co-repressor (LUG) 0.06 Archaeplastida
LOC_Os03g64300.1 No alias transcriptional co-repressor (LUG) 0.03 Archaeplastida
MA_34795g0010 No alias transcriptional co-repressor (LUG) 0.04 Archaeplastida
MA_57453g0010 No alias transcriptional co-repressor (LUG) 0.04 Archaeplastida
MA_65863g0010 No alias transcriptional co-repressor (LUG) 0.03 Archaeplastida
Mp1g15050.1 No alias transcriptional co-repressor (LUG) 0.02 Archaeplastida
Pp3c2_31650V3.1 No alias LisH dimerisation motif;WD40/YVTN repeat-like-containing domain 0.04 Archaeplastida
Smo79275 No alias RNA biosynthesis.transcriptional repression.LUG... 0.07 Archaeplastida
Solyc02g078000.2.1 No alias transcriptional co-repressor (LUG) 0.04 Archaeplastida
Solyc06g065640.3.1 No alias transcriptional co-repressor (LUG) 0.03 Archaeplastida
Zm00001e020658_P005 No alias transcriptional co-repressor (LUG) 0.05 Archaeplastida
Zm00001e027845_P004 No alias transcriptional co-repressor (LUG) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
BP GO:0010921 regulation of phosphatase activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019902 phosphatase binding IEP Neighborhood
MF GO:0019903 protein phosphatase binding IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0035303 regulation of dephosphorylation IEP Neighborhood
BP GO:0035304 regulation of protein dephosphorylation IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051336 regulation of hydrolase activity IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006594 LisH 10 36
IPR001680 WD40_repeat 699 734
IPR001680 WD40_repeat 821 858
IPR001680 WD40_repeat 742 770
IPR001680 WD40_repeat 658 692
No external refs found!