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  5. Gb_03435

Gb_03435


Description : Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana (sp|q9sn39|pp320_arath : 577.0)


Gene families : OG0009457 (Archaeplastida) Phylogenetic Tree(s): OG0009457_tree ,
OG_05_0056478 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0049395 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_03435
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00137p00065090 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g20540... 0.03 Archaeplastida
MA_103762g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida
MA_111075g0010 No alias Pentatricopeptide repeat-containing protein At1g19720... 0.06 Archaeplastida
MA_392867g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.07 Archaeplastida
MA_863836g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 273 321
IPR002885 Pentatricopeptide_repeat 174 221
IPR002885 Pentatricopeptide_repeat 476 522
IPR002885 Pentatricopeptide_repeat 375 422
IPR002885 Pentatricopeptide_repeat 434 475
IPR032867 DYW_dom 649 756
No external refs found!